DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and SMYD1

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:450 Identity:83/450 - (18%)
Similarity:149/450 - (33%) Gaps:137/450 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CHVC--EEPTKNKCSNCNQVSYCSVQHQKQDWKVHKPSCHPFKIAHNEQLGRHLVATRTIKPYEI 66
            ||.|  .:...::|..|....||....||..|..||..|...|     :.|:        .|.|.
Human    52 CHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIK-----RYGK--------VPNEN 103

  Fly    67 VLKEAPLVRGPAQISAPVCLGCLNGIEAEDHIECEQCGWPLCGPECKSLDEHKAECGLTKDRGQK 131
            :...|.::....:....:..|||..::                    .|..|             
Human   104 IRLAARIMWRVEREGTGLTEGCLVSVD--------------------DLQNH------------- 135

  Fly   132 VNVQEFGGPHPLYTCLSTVRCLLIGETSTEKASKFQDLESLESTRRGSNQWKADLVSIGQFIPKF 196
              |:.||                      |:..|  ||             :.|:.:..|:.|. 
Human   136 --VEHFG----------------------EEEQK--DL-------------RVDVDTFLQYWPP- 160

  Fly   197 FKTQKFTEEEIMKAVGALQINGHEVPT---TDPSHVAVFYTASFTENSCLPNLAKSFNKNGH--- 255
             ::|:|:.:.|....|.:..||..:..   .....|.:|.......:.|.||....||...|   
Human   161 -QSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAV 224

  Fly   256 ---------CILWAPREIKKNAHLSICYSDAMWGTADRQRHLMQTKLFKCACERCVDVTELDTNY 311
                     ..|.|..:|.:...|::.|.|.:..:.:|:|.|.:...|.|.||.|..        
Human   225 KSMFHTQMRIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQK-------- 281

  Fly   312 SAIKCEDRQCGGLMLPTKADEWNGSWRCRECHKQVQKHYVERILERAGKDIQSMEKIAENGL--K 374
               |.:|    .|.|..|.            :.:..:..|:.:::.:...::.::|....||  :
Human   282 ---KLKD----DLFLGVKD------------NPKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHE 327

  Fly   375 YLKHYEKWLPPQHFHMSEIKILLVQLLAKDQKELMVIPDDRLLLKLNF-ARELVELYEKL 433
            .:|...:.|..|....::..|.::::|:...:.|..:   :...:.:| ||.:|:.|.||
Human   328 VVKLCRECLEKQEPVFADTNIYMLRMLSIVSEVLSYL---QAFEEASFYARRMVDGYMKL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 12/37 (32%)
SET_SMYD <217..301 CDD:380997 23/98 (23%)
SMYD1NP_938015.1 SET_SMYD1 7..281 CDD:380924 61/315 (19%)
zf-MYND 52..90 CDD:460312 12/37 (32%)

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