DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-1 and SmydA-3

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061512667.1 Gene:SmydA-3 / 1278184 VectorBaseID:AGAMI1_000512 Length:500 Species:Anopheles gambiae


Alignment Length:500 Identity:136/500 - (27%)
Similarity:232/500 - (46%) Gaps:45/500 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FKIAHNEQLGRHLVATRTIKPYEIVLKEAPLVRGPAQISAPVCLGCLNGIE-AEDHIECEQCGWP 106
            :|:....:|||:.||.|.:|..|::.:|.|...||...|.|:||.|...:: .|....|.:||||
Mosquito     6 YKVLECPELGRYGVAARDLKAGELLFEETPFAVGPKLDSPPLCLECCCPVDGGEGGPRCSRCGWP 70

  Fly   107 LCGPECKS----LDEHKAECGLTKDRGQKVN-VQEFGGPHPLYTCLSTVRCLLIGETSTEKASKF 166
            || .:|.:    |..|:.||.:....|.:.. |::.........|::.:|.||..|  .::|...
Mosquito    71 LC-EDCSAGGAELVYHRGECEVFAANGVRFRPVEDSTAGCVQLDCITPLRVLLAKE--ADEARWK 132

  Fly   167 QDLESLE----STRRGSNQWKADLVSIGQFI--PKFFKTQKFTEEEIMKAVGALQINGHEVPT-T 224
            :::|.:|    ..|.|:| ||.|..:|..|:  |... .::|:.|.:.:|:|.|.:|..|..| :
Mosquito   133 REIEPMEYHDAERREGAN-WKVDENNIVAFLRGPCGL-GKRFSAELVQRAIGLLDVNAFEGRTGS 195

  Fly   225 DPSHVAVFYTASFTENSCLPNLAKSFN-KNG-HCILWAPREIKKNAHLSICYSDAMWGTADRQRH 287
            ..|...::...:...::|:||:..|.: .|| ..:.....::::...|...|:..:.||..||..
Mosquito   196 GYSCRGLYPQLAIMAHNCVPNVVHSIHPSNGFRMVARVAVDVREGDKLYTTYTYTLTGTVARQSI 260

  Fly   288 LMQTKLFKCACERCVDVTELDTNYSAIKCEDRQC-GGLMLPTKADEWNGSWRCRECHKQVQKHYV 351
            |..:|.|.|.|.||:|.|||.|::|.:.|.  :| |||:..|...:.|..|:|.:|..:.....|
Mosquito   261 LKASKFFTCRCTRCLDPTELGTHFSTLLCS--KCSGGLITSTDPLDENAEWKCGQCGFKTSGAAV 323

  Fly   352 ERILERAGKDIQSM---EKIAENGLKYLKHYEKW---LPPQHFHMSEIKILLVQLLAK-DQKELM 409
            ::.:.....:|..:   |..|.....|...|:|:   |.|.||..:.|:..|::|..: ...|:.
Mosquito   324 QKAVMTIHNEIDELACFEYEAGRLEAYETVYKKYRSVLHPLHFINTSIRHSLIELYGRIPGYEMA 388

  Fly   410 VIPDDRLLLKLNFARELVELYEKLTPCEVRTLGTLCFELH--------SAIA--EQTRRVALETS 464
            .:||..|..|:...|.::.:.:...|.:.|....:.:|||        ||.|  |..|     ..
Mosquito   389 ELPDVLLERKVELCRSILRVLDVFEPGKSRARAMILYELHAPLIMLAQSAFARGEDQR-----DG 448

  Fly   465 LSPKDRLEESLFYVDKCVNYLKYESDIFIEGHVLKQAKINRDALR 509
            .|.|.:|.|:...:::|...|.:|.....||.:...|:.:...||
Mosquito   449 KSLKQQLNEAAQILEECGAILDWEDPATPEGILANVAQQSLAQLR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312
SET_SMYD <217..301 CDD:380997 21/86 (24%)
SmydA-3XP_061512667.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.