DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-1 and LOC1272665

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_559081.4 Gene:LOC1272665 / 1272665 VectorBaseID:AGAMI1_004335 Length:511 Species:Anopheles gambiae


Alignment Length:499 Identity:138/499 - (27%)
Similarity:221/499 - (44%) Gaps:62/499 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KIAHNEQLGRHLVATRTIKPYEIVLKEAPLVRGP---AQISAPVCLGCLNGIEAEDHIECEQCGW 105
            :|..::||||.|||.|.|||.|::|.|.|:|.||   |.||   |||||.....    .|..|  
Mosquito    10 EIRKSDQLGRFLVANRDIKPGELILAEDPIVVGPYWDADIS---CLGCLGPASR----TCRVC-- 65

  Fly   106 PLCGPECKSLDEH-KAECGLTKDRGQKVNVQEFGGPHPLYTCLSTVRCLLIGETSTEKASKFQDL 169
             |.||.|:....| ..||.. .::..|:| :.|...|  :..::.:||||:..:..:|.::...:
Mosquito    66 -LKGPLCRDCSRHDPVECSF-YEQASKLN-KNFLFDH--FNIITPLRCLLLYRSDRDKYNEMMAM 125

  Fly   170 ESLESTRRGSNQWKADLVSIGQFIPKFFKTQK---------FTEEEIMKAVGALQINGHEV-PTT 224
            ||...:||.:..|...    .|::.:....:|         .|.|.:.:..|.|.:|..|: ...
Mosquito   126 ESHFESRRDTEIWHIH----NQYVVEPMLNEKDFQQIDDLTVTGELLQRICGILDVNTFEIRGNM 186

  Fly   225 DPSHV-------AVFYTASFTENSCLPNLAKSFNKNGHCILWAPREIKKNAHLSICYSDAMWGTA 282
            |...|       .::...|...::|..|...:.:......|::...||....|...|:..::.|.
Mosquito   187 DSQGVQMNNLARGLYPKTSLMTHNCQTNTLIAVDGMSKLRLYSSIGIKAGELLYYNYTRVLFSTF 251

  Fly   283 DRQRHLMQTKLFKCACERCVDVTELDTNYSAIKCEDRQCGGLMLPTKADEWNGSWRCRECHKQVQ 347
            :||.||.:.|.|.|.|.||.|.|||.|:.|::||.....|..:..|:..:    |.|..|..|:.
Mosquito   252 ERQTHLRKGKYFICNCARCSDPTELGTHLSSLKCTACDDGLCVFHTETPK----WECLTCGHQLP 312

  Fly   348 KHYVERILERAGKDIQSMEKIAENGLKYLKHYEKWLPPQHFHMSEIKILLVQLLAKDQKELMV-- 410
            :.||.:|:..|..||.|....:.|..|.:..:.|.|.|.|..:.|.|    |.||.:.:.:.:  
Mosquito   313 REYVNQIMCEARDDISSCALDSRNLEKVIGKHSKTLNPHHSLVLEAK----QSLAGELRNMCMSY 373

  Fly   411 ----IPDDRLLLKLNFARELVELYEKLTPCEVRTLGTLCFELHSAIAEQTRR----VALETSLSP 467
                :|...|..||....|::::...|.|...|..|...:|.|:|:.:.:||    ..::|   |
Mosquito   374 DIHNVPRQALKRKLELCEEMLQILRVLDPGVSRLTGIALYEYHAALVDLSRRNHDIGEIKT---P 435

  Fly   468 K--DRLEESLFYVDKCVNYLKYESDIFIEGHVLKQAKINRDALR 509
            :  :||:.|...:.:.:..|.:|.....||.:.|:|......||
Mosquito   436 ELLERLKLSEAALKEAIGMLVFEHRTTPEGQLTKKAMCELKELR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312
SET_SMYD <217..301 CDD:380997 21/91 (23%)
LOC1272665XP_559081.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.