DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and LOC1270660

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061511731.1 Gene:LOC1270660 / 1270660 VectorBaseID:AGAMI1_014244 Length:615 Species:Anopheles gambiae


Alignment Length:492 Identity:104/492 - (21%)
Similarity:182/492 - (36%) Gaps:141/492 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KNKCSNCNQVSYCSVQHQKQDW--KVHKP---SCHPFKIAHNEQLGRHLVATRTIKPYEIVLKEA 71
            :||.::.::||...|:..:..:  |.:.|   :|  .::..|.:.|||:||||.:|..::|:.|.
Mosquito   181 RNKNASSSKVSPDVVEEPELSYPAKENAPQVANC--LELRKNVEYGRHVVATRKLKVGDVVMIER 243

  Fly    72 PLVRGPAQISAPVCLGCLNGIEAEDHIECEQCGWPL-CGPEC--KSLDE-HKAECGLTKDRGQKV 132
            |||.........|.....:|......|.||.|...: |..||  |:.:: |:.||||.:|     
Mosquito   244 PLVTVLKDSFRYVRCDFCHGERPFTLIPCEGCTMAMYCSEECLSKAYNKYHRYECGLLRD----- 303

  Fly   133 NVQEFGGPHPLYTCLSTVRCLLIG-ETSTEKASKFQD-LESL-ESTRRG---------------- 178
             :.|.....||.    .:|.:.|. .|........:| |.:| ||...|                
Mosquito   304 -LWEVFEEVPLI----AIRMIAIAIATFDNNPETLKDHLNALDESNVNGFTMDWNKATQQDIFNT 363

  Fly   179 -----SNQWKADLVSIGQFI-----------------------PKFFKTQKFTEEEIMKAV---- 211
                 :||.:.|.:.:...|                       |.|   .||..:.|::.:    
Mosquito   364 VHVLTTNQERRDSIFVAFHIFNATILHTLILERTELGPVCGANPAF---NKFLLDLILRYMQIVN 425

  Fly   212 ---GALQINGHEVP--TTDPSHVAVFYTASFTENSCLPNLAKSFNKNGHCILWAPREIKKNAHLS 271
               ..|..|.::|.  ..:...|..:...|...:||.||:.:...::|.|.::..|.:.:.:.|.
Mosquito   426 CNRKLLSFNAYKVKEYVAESFAVGCYPLISMLNHSCAPNVQRITLRDGRCAVFVIRPVLEGSQLF 490

  Fly   272 ICYSDAMWGTADRQRHLMQTKL-----FKCACERCVDVTELDTNYSAIKCEDRQCGGLMLPTKAD 331
            ..|..   |....:|.:.|:.|     |:|.||.|.      .||               ||   
Mosquito   491 DSYET---GHTLHEREMRQSMLSFMYSFQCTCEACT------FNY---------------PT--- 528

  Fly   332 EWNGSWRCRECHKQVQKHYVERILERAGKDIQSMEKIAENGLKYLKHYEKWLPPQHFHMSEIKIL 396
                 |:.              :||  |.|:.:.|.:|    |:| :|.:.|  ......:::.:
Mosquito   529 -----WKV--------------LLE--GSDVTNSEDMA----KHL-YYNRML--SSHEDKKVRKI 565

  Fly   397 LVQLLAKDQKELMVIPDDRLLLK-LNFARELVELYEK 432
            :.:|.:...:...:.|:..:..: :.|.|.|..||.:
Mosquito   566 MAELRSFLNETPKLYPESEVCFRQVEFVRSLQVLYNQ 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 7/32 (22%)
SET_SMYD <217..301 CDD:380997 21/90 (23%)
LOC1270660XP_061511731.1 None

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