DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and SmydA-4

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061514871.1 Gene:SmydA-4 / 1268645 VectorBaseID:AGAMI1_003090 Length:528 Species:Anopheles gambiae


Alignment Length:523 Identity:138/523 - (26%)
Similarity:240/523 - (45%) Gaps:51/523 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NKCSNCNQVSYCSVQHQKQDWKVHKPSCHPFKIAHNEQLGRHLVATRTIKPYEIVLKEAPLVRGP 77
            |.||..::.....||.:         |..|:.:..:||:||::||.|.:|..:::::..|.|.||
Mosquito    26 NPCSEYDRQPVAEVQLE---------SSKPYLVKRSEQVGRYIVAARDLKAGDVIIETPPFVVGP 81

  Fly    78 AQISAPVCLGCLNGIEAEDHI-ECEQCGWPLCGPECKSL----DEHKAECGLTKDRGQKVNVQEF 137
            ...:.||||||.|..:....: .||.|.|.:|.|.|..|    ...:.||...:|:....::|. 
Mosquito    82 CAETEPVCLGCHNAFKPGSVVYRCEICNWRICSPSCHGLAPAGTHRQLECIPLRDKAVHKHLQT- 145

  Fly   138 GGPHP----LYTCLSTVRCLLIGETSTEKASKFQDLESLESTRRG-SNQWKADLVSIGQFIPKFF 197
             .|..    :|..:.|:||:|:......:..:...::.|...|:. ...|..:...|.:.|...:
Mosquito   146 -SPTAQVKLMYEAILTLRCMLLKTVDRPQYDRLLGMDPLNDVRQQIPKLWNRNQKEIVERIRNQW 209

  Fly   198 KTQKFTEEEIMKAVGALQINGHEVPTTDPSHVAVFYTASFTENSCLPNLAKS-FNKNGHCILWAP 261
            ...:::|.|:....|.:::|..||........|:|..|....:.|.||...: ..:..|..:...
Mosquito   210 GFAEYSELELHTICGIIEVNAFEVGQEPTKARALFPEAYLLMHDCTPNTGHTDAPQTHHLTVRVL 274

  Fly   262 REIKKNAHLSICYSDAMWGTADRQRHLMQTKLFKCACERCVDVTELDTNYSAIKCEDRQC-GGLM 325
            |::|....|::.|:..:.||..|::||.:.|.|.|.|.||.|.:||.||.||::|  ::| .|.:
Mosquito   275 RDVKAGEPLTLTYAHILQGTLKRRQHLREEKFFSCNCRRCTDPSELGTNCSALRC--KKCPRGHI 337

  Fly   326 LPTKADEWNGSWRCRECHKQVQKHYVERILERAGKDIQSMEKIAENGLK-YLKHYEKWLPPQHFH 389
            |||........|.||:|...:....|..:||:..:.::::.....:||: :|:.....|...|:.
Mosquito   338 LPTDPLNPETEWHCRQCSTVMSCEAVILLLEQLSQQLETIGGNDVDGLETFLRVQGAVLHDNHYL 402

  Fly   390 MSEIKILLVQLLAKDQKELMVIPD---DRLLLKLNFARELVELYEKLTPCEVRTLGTLCFELHSA 451
            :..:|..|.:|..|  .|..:||.   ::|..|....|:|:|:.::|.|...|..||:.:|:|..
Mosquito   403 LLSVKHSLCELYGK--IEGFLIPQLSREQLKRKETLCRDLLEVVDQLEPGLSRLRGTIMYEMHVP 465

  Fly   452 I---AEQTRRVALETSLSPKDRLEESLFYVDKCVNYLKYESDIFI----EG---HVLKQAKINRD 506
            :   |.|..:..:......:.||:|        |..|..||:..:    ||   |.:.:|.  ||
Mosquito   466 LLIEAGQLFQGGVIQRAELRRRLKE--------VQRLLKESERILALEPEGTPEHGIAEAA--RD 520

  Fly   507 ALR 509
            ||:
Mosquito   521 ALK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 5/26 (19%)
SET_SMYD <217..301 CDD:380997 23/84 (27%)
SmydA-4XP_061514871.1 None

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