DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp20-33 and USP6

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001291213.1 Gene:USP6 / 9098 HGNCID:12629 Length:1406 Species:Homo sapiens


Alignment Length:1045 Identity:215/1045 - (20%)
Similarity:340/1045 - (32%) Gaps:387/1045 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DSNASDSEGTDTAKGSGTGLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSAR 124
            :|:..|.:...|.||:    .||.|:.|||:|||::|.:||..|:|.|||:...|.|      ..
Human   516 NSSKIDRQKVPTEKGA----TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE------LN 570

  Fly   125 RCKP----GGLAKSYRRLMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFM 185
            |..|    |.:||.|..|:||:|...   ::.:||..:...|....|.|.|:||.|:||.|...:
Human   571 RTNPIGMKGHMAKCYGDLVQELWSGT---QKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLL 632

  Fly   186 DQLHEELTEQVSMLPQTQNQPQYQSLQQQQPSETDDENDDEAAPASLSHASESEYDTCESSMSER 250
            |.|||:|.       :...:| |..|:     ::|...|.|.|..:..:                
Human   633 DGLHEDLN-------RVHEKP-YVELK-----DSDGRPDWEVAAEAWDN---------------- 668

  Fly   251 SAEVLLKTEYFVTPCRTNGSNSGLPEGHSVQLQQAPLQHQQKNASSAEQKPIEAARSIISDVFDG 315
                                                  |.::|            ||||.|:|.|
Human   669 --------------------------------------HLRRN------------RSIIVDLFHG 683

  Fly   316 KLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAAETSARTNEGWLSWM 380
            :|.|.|:|.||..:|.|.:.|..||||:|...::::     .::|..|:.. |..|         
Human   684 QLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMDL-----EITVIKLDGT-TPVR--------- 733

  Fly   381 WNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIK---------YSRVLTLPE 436
                    ||..:.:               |..|         ||:|         .|..:.|.|
Human   734 --------YGLRLNM---------------DEKY---------TGLKKQLRDLCGLNSEQILLAE 766

  Fly   437 VLCIHLKRFRND-------------------------------LSYSSKISSDVYFPLEGFDMRP 470
            |...::|.|..|                               :.:||..|::..|.|.      
Human   767 VHDSNIKNFPQDNQKVQLSVSGFLCAFEIPVPSSPISASSPTQIDFSSSPSTNGMFTLT------ 825

  Fly   471 YIHKDCKSEVAIYN-LSSVICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAY 534
             .:.|....:.|.| :.:.:...||...     |....:||......|...|           .|
Human   826 -TNGDLPKPIFIPNGMPNTVVPCGTEKN-----FTNGMVNGHMPSLPDSPFT-----------GY 873

  Fly   535 VLFYHKHNPQMKLVRDEAMTLSTSH--------PL---C-------DSDIQFYITREWLSRLATF 581
            ::..|:     |::|.|...||...        ||   |       |.....:|...||:|    
Human   874 IIAVHR-----KMMRTELYFLSPQENRPSLFGMPLIVPCTVHTRKKDLYDAVWIQVSWLAR---- 929

  Fly   582 SEPGPINNQEMLCPHGGILHSK-ADVISQIAVPISQPL---------WDYLY------------- 623
              |.|        |....:|:: .|.......|.:..:         |...|             
Human   930 --PLP--------PQEASIHAQDRDNCMGYQYPFTLRVVQKDGNSCAWCPQYRFCRGCKIDCGED 984

  Fly   624 RTFGGGPAVNIIF-------------ECEICKRAAETLSRRQQYE-------LNEFTKYNGLQNE 668
            |.|.|...:.:.:             |..:.|..:...|||.|.|       |..||.    :.|
Human   985 RAFIGNAYIAVDWHPTALHLRYQTSQERVVDKHESVEQSRRAQAEPINLDSCLRAFTS----EEE 1045

  Fly   669 FDSTAIYAIAMPWLRSWQQFSRGKTHKDPGPITNEGIAAPTENGSATVSCVRLGSDYAQLNARLW 733
            ...:.:|           ..|:.|||                       |:      |.....||
Human  1046 LGESEMY-----------YCSKCKTH-----------------------CL------ATKKLDLW 1070

  Fly   734 R-------------FLHNIYGGGPEII--LRQA------LSDEDDA--EEIEIIDQDDECDDDED 775
            |             |:::.:....:|:  ||::      |...|.|  :...:..|.||......
Human  1071 RLPPFLIIHLKRFQFVNDQWIKSQKIVRFLRESFDPSAFLVPRDPALCQHKPLTPQGDELSKPRI 1135

  Fly   776 QDLEGEGEDEEIAAASYQHNHSDTESNL--GIRNTPSPSPSTSPSPSLTGTRQPMETESDLRPSS 838
            ...|.:..|.:.:|.......|.:.|:|  .|.::|..|||:|..   :||..|....|.  |:|
Human  1136 LAREVKKVDAQSSAGKEDMLLSKSPSSLSANISSSPKGSPSSSRK---SGTSCPSSKNSS--PNS 1195

  Fly   839 SKSKRSRSKMKVSALRLNMRNR---GKRNRSAFK-----QYAEMFGA--KGNYNAHSNAEPVVSE 893
            |.....|||.::...::..:|:   .|:|..|.|     |..|:..|  :|:....|..|.|.  
Human  1196 SPRTLGRSKGRLRLPQIGSKNKPSSSKKNLDASKENGAGQICELADALSRGHMRGGSQPELVT-- 1258

  Fly   894 KDEKDKDNDRTVAFPSEYSLPISIPFQSDNFQVNGVHEKSRDKGKLRNSSKSGSTAATKENVTLQ 958
                          |.::.:.::..|..::.............|:|.|.|:..||...:|:..::
Human  1259 --------------PQDHEVALANGFLYEHEACGNGCGDGYSNGQLGNHSEEDSTDDQREDTHIK 1309

  Fly   959 KFVTL 963
            ....|
Human  1310 PIYNL 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 110/503 (22%)
Peptidase_C19 80..>204 CDD:271592 46/127 (36%)
Peptidase_C19R 307..538 CDD:239139 54/271 (20%)
DUSP 560..643 CDD:197831 20/128 (16%)
DUSP 667..755 CDD:197831 16/108 (15%)
USP6NP_001291213.1 TBC 97..312 CDD:214540
DUF4607 <332..407 CDD:292024
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..380
UBP12 <528..1114 CDD:227847 163/810 (20%)
Peptidase_C19 533..>723 CDD:271592 76/282 (27%)
Peptidase_C19 <1023..1367 CDD:271592 73/357 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1120..1231 30/115 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1384..1406
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.