DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp20-33 and UBP12

DIOPT Version :10

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_012338.1 Gene:UBP12 / 853242 SGDID:S000003733 Length:1254 Species:Saccharomyces cerevisiae


Alignment Length:853 Identity:180/853 - (21%)
Similarity:274/853 - (32%) Gaps:362/853 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 TGLVGLQNIANTCYMNSALQALSNLPPMTHYF--------INCSDLVEYIAEQSARRCKPGGLAK 133
            :|..||.|:.||||||||||.|.::|.:..||        ||..:.:.|          .|.:|:
Yeast   361 SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGY----------HGYVAR 415

  Fly   134 SYRRLMQEIWQD---VDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEEL--- 192
            ::..|:|:::|:   :........|......|...:.||.||.|.|:||||...:|.|||:|   
Yeast   416 AFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLAFLLDSLHEDLNRI 480

  Fly   193 -----TEQVSMLP--------------------------------------QTQNQPQYQSLQQQ 214
                 ||:.|:.|                                      .|...|:.|::   
Yeast   481 IKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFVGMYKSTLYCPECQNV--- 542

  Fly   215 QPSETDDENDDEAAP------------------------ASLSHASE------------------ 237
              |.|.|..:|...|                        ..||.:|.                  
Yeast   543 --SITFDPYNDVTLPLPVDTVWDKTIKIFPMNSPPLLLEVELSKSSTYMDLKNYVGKMSGLDPNT 605

  Fly   238 ------------SEYDTCESSMSERSAEVLLK--------------------------------- 257
                        ..|::.||:....:.:.|:|                                 
Yeast   606 LFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIFYELPVTNDNEVIVPVLNTRIEKGYKN 670

  Fly   258 -----TEYFVTPCRTNGSNSGL---------------------PEGHSVQLQQA-PLQHQQKNAS 295
                 ..:|:|......:|.|.                     |.|:......| ||..::....
Yeast   671 AMLFGVPFFITLKEDELNNPGAIRMKLQNRFVHLSGGYIPFPEPVGNRTDFADAFPLLVEKYPDV 735

  Fly   296 SAEQ-KPIEAARSI-ISD----VFDGKLLS-------------------SVQCLTCDRVSTREET 335
            ..|| |.|....|| ::|    .|..|:||                   .:..|..|:.:..::.
Yeast   736 EFEQYKDILQYTSIKVTDKDKSFFSIKILSVEKEQQFASNNRTGPNFWTPISQLNLDKATDIDDK 800

  Fly   336 FQDLSLPIPNRDFL-----NVLHQ-------------------------------THSLSVQSLN 364
            .:|:...|.|...|     .||.|                               |::.:|.:.|
Yeast   801 LEDVVKDIYNYSSLVDCAEGVLMQVDDEGDTEGSEAKNFSKPFQSGDDEENKETVTNNENVNNTN 865

  Fly   365 ----------AAETSART-----------------------------------------NEGWLS 378
                      ..|..|.|                                         ||.:..
Yeast   866 DRDEDMELTDDVEEDASTEPELTDKPEALDKIKDSLTSTPFAILSMNDIIVCEWSELGSNEAFSD 930

  Fly   379 ---WMW--------------NMLRSWIYGPSVTLYDCMASFFSADELKG--DNMYSCERCNKLRT 424
               :.|              .:.||.....::||.||: ..||..|:.|  |:.| |..|.:.|.
Yeast   931 DKIYNWENPATLPNKELENAKLERSNAKERTITLDDCL-QLFSKPEILGLTDSWY-CPTCKEHRQ 993

  Fly   425 GIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPY-IHKDCKSEVAIYNLSSV 488
            ..|..::...|::|.||||||.:..|:|.||.:.|.||:...|:..| ::|| .....||:|.:|
Yeast   994 ATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKD-DPRGLIYDLYAV 1057

  Fly   489 ICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFY--------------- 538
            ..|:|.:||||||.:.:|..:.|||.|||..|||.:.|...:..||:|||               
Yeast  1058 DNHYGGLGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGNGLGSSKL 1122

  Fly   539 --------HKHNPQMKLVRDEAMTL------------STSHPLCDSDIQFYITREWLSRLATFSE 583
                    |.::.::|.:.||.|.|            |.....|:.|:|   ..|:.:|..   |
Yeast  1123 QEIIQKSRHGYDERIKKIYDEQMKLYEFNKTDEEEDVSDDMIECNEDVQ---APEYSNRSL---E 1181

  Fly   584 PGPINNQE 591
            .|.|..|:
Yeast  1182 VGHIETQD 1189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 80..538 CDD:425685 161/760 (21%)
DUSP 560..643 CDD:197831 9/32 (28%)
DUSP 667..755 CDD:197831
UBP12NP_012338.1 UBP12 99..1111 CDD:227847 164/767 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.