DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and UBP12

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_012338.1 Gene:UBP12 / 853242 SGDID:S000003733 Length:1254 Species:Saccharomyces cerevisiae


Alignment Length:853 Identity:180/853 - (21%)
Similarity:274/853 - (32%) Gaps:362/853 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 TGLVGLQNIANTCYMNSALQALSNLPPMTHYF--------INCSDLVEYIAEQSARRCKPGGLAK 133
            :|..||.|:.||||||||||.|.::|.:..||        ||..:.:.|          .|.:|:
Yeast   361 SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGY----------HGYVAR 415

  Fly   134 SYRRLMQEIWQD---VDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEEL--- 192
            ::..|:|:::|:   :........|......|...:.||.||.|.|:||||...:|.|||:|   
Yeast   416 AFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLAFLLDSLHEDLNRI 480

  Fly   193 -----TEQVSMLP--------------------------------------QTQNQPQYQSLQQQ 214
                 ||:.|:.|                                      .|...|:.|::   
Yeast   481 IKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFVGMYKSTLYCPECQNV--- 542

  Fly   215 QPSETDDENDDEAAP------------------------ASLSHASE------------------ 237
              |.|.|..:|...|                        ..||.:|.                  
Yeast   543 --SITFDPYNDVTLPLPVDTVWDKTIKIFPMNSPPLLLEVELSKSSTYMDLKNYVGKMSGLDPNT 605

  Fly   238 ------------SEYDTCESSMSERSAEVLLK--------------------------------- 257
                        ..|::.||:....:.:.|:|                                 
Yeast   606 LFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIFYELPVTNDNEVIVPVLNTRIEKGYKN 670

  Fly   258 -----TEYFVTPCRTNGSNSGL---------------------PEGHSVQLQQA-PLQHQQKNAS 295
                 ..:|:|......:|.|.                     |.|:......| ||..::....
Yeast   671 AMLFGVPFFITLKEDELNNPGAIRMKLQNRFVHLSGGYIPFPEPVGNRTDFADAFPLLVEKYPDV 735

  Fly   296 SAEQ-KPIEAARSI-ISD----VFDGKLLS-------------------SVQCLTCDRVSTREET 335
            ..|| |.|....|| ::|    .|..|:||                   .:..|..|:.:..::.
Yeast   736 EFEQYKDILQYTSIKVTDKDKSFFSIKILSVEKEQQFASNNRTGPNFWTPISQLNLDKATDIDDK 800

  Fly   336 FQDLSLPIPNRDFL-----NVLHQ-------------------------------THSLSVQSLN 364
            .:|:...|.|...|     .||.|                               |::.:|.:.|
Yeast   801 LEDVVKDIYNYSSLVDCAEGVLMQVDDEGDTEGSEAKNFSKPFQSGDDEENKETVTNNENVNNTN 865

  Fly   365 ----------AAETSART-----------------------------------------NEGWLS 378
                      ..|..|.|                                         ||.:..
Yeast   866 DRDEDMELTDDVEEDASTEPELTDKPEALDKIKDSLTSTPFAILSMNDIIVCEWSELGSNEAFSD 930

  Fly   379 ---WMW--------------NMLRSWIYGPSVTLYDCMASFFSADELKG--DNMYSCERCNKLRT 424
               :.|              .:.||.....::||.||: ..||..|:.|  |:.| |..|.:.|.
Yeast   931 DKIYNWENPATLPNKELENAKLERSNAKERTITLDDCL-QLFSKPEILGLTDSWY-CPTCKEHRQ 993

  Fly   425 GIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPY-IHKDCKSEVAIYNLSSV 488
            ..|..::...|::|.||||||.:..|:|.||.:.|.||:...|:..| ::|| .....||:|.:|
Yeast   994 ATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKD-DPRGLIYDLYAV 1057

  Fly   489 ICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFY--------------- 538
            ..|:|.:||||||.:.:|..:.|||.|||..|||.:.|...:..||:|||               
Yeast  1058 DNHYGGLGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGNGLGSSKL 1122

  Fly   539 --------HKHNPQMKLVRDEAMTL------------STSHPLCDSDIQFYITREWLSRLATFSE 583
                    |.::.::|.:.||.|.|            |.....|:.|:|   ..|:.:|..   |
Yeast  1123 QEIIQKSRHGYDERIKKIYDEQMKLYEFNKTDEEEDVSDDMIECNEDVQ---APEYSNRSL---E 1181

  Fly   584 PGPINNQE 591
            .|.|..|:
Yeast  1182 VGHIETQD 1189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 161/761 (21%)
Peptidase_C19 80..>204 CDD:271592 47/180 (26%)
Peptidase_C19R 307..538 CDD:239139 86/361 (24%)
DUSP 560..643 CDD:197831 9/32 (28%)
DUSP 667..755 CDD:197831
UBP12NP_012338.1 UBP12 99..1111 CDD:227847 164/767 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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