DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and USP11

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001358001.1 Gene:USP11 / 8237 HGNCID:12609 Length:920 Species:Homo sapiens


Alignment Length:793 Identity:175/793 - (22%)
Similarity:276/793 - (34%) Gaps:283/793 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VEH----RNRTIHSSQGHTLANGYAMGDPR---------SSRCHDKLFSGSLKSL---------- 55
            |.|    ::.|:..|  ||.:.|..:...|         .:|...|...|||..|          
Human   159 VRHNDLGKSHTVQFS--HTDSIGLVLRTARERFLVEPQEDTRLWAKNSEGSLDRLYDTHITVLDA 221

  Fly    56 -----------ARREDS----------NASDSEGTDTAKGSGTGLVGLQNIANTCYMNSALQALS 99
                       .|::|.          |.:.||..:..||. .|:.||.|:.|||:||||||.||
Human   222 ALETGQLIIMETRKKDGTWPSAQLHVMNNNMSEEDEDFKGQ-PGICGLTNLGNTCFMNSALQCLS 285

  Fly   100 NLPPMTHYFI-NCSDLVEYIAEQSARRCKP----GGLAKSYRRLMQEIWQDVDDPKEFIAPRGIL 159
            |:|.:|.||: ||     |:.|.:.|  .|    |.:|::|..|:::.|   ......|.|....
Human   286 NVPQLTEYFLNNC-----YLEELNFR--NPLGMKGEIAEAYADLVKQAW---SGHHRSIVPHVFK 340

  Fly   160 YGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEELTEQVSMLPQTQNQPQYQSLQQQQPSETDDEND 224
            ..:......|.||||||:||.|...:|.|||:|..        ..:.:|..|     .:.....|
Human   341 NKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNR--------VKKKEYVEL-----CDAAGRPD 392

  Fly   225 DEAA-PASLSHASESEYDTCESSMSERSAEVLLKTEY------FVTPCRTNGS---------NSG 273
            .|.| .|..:|             ..|:..|::.|.:      .|.|...|.|         :..
Human   393 QEVAQEAWQNH-------------KRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVP 444

  Fly   274 LPEGHSVQLQ---------QAPLQHQ----QKNASS------AEQKPIEAARSIISDVFDGKL-- 317
            ||..|...|:         :.|.||:    :|...|      ::...|...|.:::|||..:.  
Human   445 LPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGISPERMMVADVFSHRFYK 509

  Fly   318 -------LSSVQCLTCD---------RVSTREETFQDLSLPI------PNRDF------------ 348
                   |||:  |..|         |:...|.:.:|:.:|:      |.||:            
Human   510 LYQLEEPLSSI--LDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYNNSYYGLMLFGH 572

  Fly   349 ----------------LNVL--------------------------------------------- 352
                            .|||                                             
Human   573 PLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLRDPE 637

  Fly   353 -------------------------------HQTHSLSVQSLNAAETSARTNEG---------WL 377
                                           .:....::|::|:..||.||...         .:
Human   638 PEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNSNGTSDRTTSPEEVHAQPYIAI 702

  Fly   378 SWMWNMLRSW------------------IYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRT 424
            .|...|.:.:                  :....|.|.:|:..|.:.:.|:.:|.:.|..|.:.:.
Human   703 DWEPEMKKRYYDEVEAEGYVKHDCVGYVMKKAPVRLQECIELFTTVETLEKENPWYCPSCKQHQL 767

  Fly   425 GIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYI---HKDCKSEVAIYNLS 486
            ..|...:..|||:|.||||||........|:.:.|.||:...|...::   ..:...|:..|:|.
Human   768 ATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLI 832

  Fly   487 SVICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFYHKHNPQMKLVRDE 551
            :|..|:|.:..||||.||.|..:|:|:.|||..|:.|:...::|..||||||.:.:...:|:...
Human   833 AVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPA 897

  Fly   552 AMTLSTSHPLCDS 564
            ..:.:.:.|.|.|
Human   898 GSSGAPASPACSS 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 147/656 (22%)
Peptidase_C19 80..>204 CDD:271592 47/128 (37%)
Peptidase_C19R 307..538 CDD:239139 75/388 (19%)
DUSP 560..643 CDD:197831 3/5 (60%)
DUSP 667..755 CDD:197831
USP11NP_001358001.1 UBP12 56..886 CDD:227847 171/767 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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