DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and Usp20

DIOPT Version :10

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_083122.1 Gene:Usp20 / 74270 MGIID:1921520 Length:916 Species:Mus musculus


Alignment Length:820 Identity:324/820 - (39%)
Similarity:455/820 - (55%) Gaps:133/820 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DSNASDSEGTDTAKGSGTGLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSAR 124
            |...|:||..|.   ...||.|::|:.|:||||:|||||||.||:|.:|:.|..||        |
Mouse   128 DEGESESEDDDL---KPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV--------R 181

  Fly   125 RCKPGGLAKSYRRLMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLH 189
            ..|...|.|||::|:.|:|.  .....::.|..:.:||:.|:||||||.|.||||||||.|||||
Mouse   182 TDKKPALCKSYQKLISEVWH--KKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 244

  Fly   190 EELTEQVSMLPQTQNQPQYQSLQQQQPSETDDENDDEAAPAS---LSHASES------------- 238
            |||.|     |...........:....|:||:..|.:.:|:.   ||..|.|             
Mouse   245 EELKE-----PMVAAVAALTDARDSDSSDTDERRDGDRSPSEDEFLSCDSSSDRGEGDGQGRGGG 304

  Fly   239 ---------------------------------------------EYDTCESSMSERSAEVLLKT 258
                                                         :.||..:|:.|:|.|....:
Mouse   305 SSKAEMELLISDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMASLDEQSREAQPPS 369

  Fly   259 EYFVTPCRT----------NGSNSGLP-----EGHSVQLQQAP-------------LQHQQKNAS 295
            ....:||:|          :.|....|     |||| :|..:|             |:..|..::
Mouse   370 PRSTSPCQTPEPDNEAHIRSSSRPCSPVHHHHEGHS-KLSSSPPRASPVRMGPSYVLKKAQVPST 433

  Fly   296 SAEQKPIEAARSIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSV 360
            ...::..::.||:|||||:|.:||.|||||||||||..|||||||||||.::.|..||.....:|
Mouse   434 GGRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNV 498

  Fly   361 QSLNAAETSARTNEGWLSWMWNMLR--------SWIYGPSVTLYDCMASFFSADELKGDNMYSCE 417
            .:...|...:.:::|||:::...:|        ||.:||.|||.||:|:||:|||||||||||||
Mouse   499 PAKPGACGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCE 563

  Fly   418 RCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVAI 482
            ||.|||.|:||.:||.|||:||:||||||:::.||.|:||.|.|||||.|:||::.|:|.|:|..
Mouse   564 RCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQVTT 628

  Fly   483 YNLSSVICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFYHKHNPQMKL 547
            |:|.||||||||.|.|||..:.:|.:||:|||||||:||||...:||:.:||||||.|.:.:...
Mouse   629 YDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLFYRKSSEEAMR 693

  Fly   548 VRDEAMTLSTSHPLCDSDIQFYITREWLSRLATFSEPGPINNQEMLCPHGGILHSKADVISQIAV 612
            .|.:.::|:....  .|.::||::||||::..||:|||||.|...||.||||..:|...|..:.|
Mouse   694 ERQQVVSLAAMRE--PSLLRFYVSREWLNKFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVV 756

  Fly   613 PISQPLWDYLYRTFGGGPAVNIIFECEICKRAAETLSRRQQYELNEFTKYN-GLQNEFDSTAIYA 676
            .:.|.:|::||..||||||||.::.|.||:...|.|::|::.|::.|.|.| ..|.|.....||.
Mouse   757 ILPQSVWEHLYSRFGGGPAVNHLYVCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAVIYC 821

  Fly   677 IAMPWLRSWQQFSRGKTHKDPGPITNEGIAAPTENGSATVSCVRLGSDYAQLNARLWRFLHNIYG 741
            |:|.|.|.|:.|.:||..:.||||.|..||  ...||..:. ::.|:|..|::...|.:|.::||
Mouse   822 ISMHWFREWEAFVKGKDSEPPGPIDNSRIA--QVKGSGHIQ-LKQGADCGQISEETWTYLSSLYG 883

  Fly   742 GGPEIILRQALSDEDDAEEIEIIDQDDECDDDEDQDLEGE 781
            |||||.:||:::...|.|.:.           .:|.:|.|
Mouse   884 GGPEIAIRQSVAQLPDPESLH-----------GEQKIEAE 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 80..538 CDD:425685 226/554 (41%)
DUSP 560..643 CDD:197831 39/82 (48%)
DUSP 667..755 CDD:197831 34/87 (39%)
Usp20NP_083122.1 zf-UBP 30..90 CDD:460464
UBP12 <73..688 CDD:227847 236/578 (41%)
UCH 145..684 CDD:425685 226/554 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..420 26/162 (16%)
DUSP 704..787 CDD:197831 39/84 (46%)
DUSP 812..896 CDD:197831 34/86 (40%)
Blue background indicates that the domain is not in the aligned region.

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