DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and Usp16

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_077220.2 Gene:Usp16 / 74112 MGIID:1921362 Length:825 Species:Mus musculus


Alignment Length:680 Identity:139/680 - (20%)
Similarity:230/680 - (33%) Gaps:216/680 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 KSLARREDSNASDSEGTDTAKGSGTGLVGLQNIANTCYMNSALQALSNLPPMTHYF--INCSDLV 115
            |:...||.|.....|.......|...:.||.|:.|||:.|:.:|.||..|.:....  :..|..:
Mouse   168 KNEQEREKSENLAKETIPMDSASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTI 232

  Fly   116 EYIAEQSARRCK--------PGGLAKSYRRLMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGY 172
            ..|........:        ||.|..:..:.:.|:   .::.|..:.|:.:...:......|:||
Mouse   233 VKIEPPDLALTEPLEVNLEPPGPLTLAMSQFLSEM---QENKKRVVTPKELFSQVCKKATRFKGY 294

  Fly   173 QQHDTQEFLRCFMDQLHEELTEQVS--MLPQTQNQPQYQSLQQQQPSETDDENDDEAAPASLSHA 235
            ||.|:||.||..:|.:..|..::||  :|....|..  :.|.::..::..|....:|.|:.:...
Mouse   295 QQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNST--EKLDEEVKNKVKDYEKKKAIPSFVDRI 357

  Fly   236 SESEY------DTC-----------------------ESSMSERSAEVLLKTE-----------Y 260
            ...|.      |.|                       :.|:::::.::.::.|           |
Mouse   358 FGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSINDKNVKMTMEEEDKDSEEEKDDSY 422

  Fly   261 FVTPCRTNGSNSGLPEGHSVQLQQAPLQHQQKNASS----------------------AEQKPIE 303
            .       .|.|.||.|.|..||:...:..:|.|.:                      .|....|
Mouse   423 M-------KSRSDLPSGTSKHLQKKAKKQAKKQAKNQRRQQKIQERFLHFNELCATDYTEDNERE 480

  Fly   304 AARSIISDV-------------------------FDGKLLSSVQCLTCDRVSTREETFQDLSL-- 341
            |..::..:|                         .||      |....:|....:|:.:||.:  
Mouse   481 ADTALAGEVEVDTDSTHGSQEEATQIELSVNQKDLDG------QESMIERTPDVQESPEDLGVKS 539

  Fly   342 -----------PIPN--RDF------------LNVLHQTHSLSVQSLNAA--------------- 366
                       |.|.  |||            |::::...:|   :||||               
Mouse   540 ANTESDLGIVTPAPECPRDFNGAFLEERTSGELDIINGLKNL---NLNAAVDPDEINIEIPNDSH 601

  Fly   367 ------ETSARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCE-----RCN 420
                  |......|.....:.|  |........::..|:..|...::|:..|...||     :||
Mouse   602 SAPKVYEVMNEDPETAFCTLAN--REAFSTDECSIQHCLYQFTRNEKLQDANKLLCEVCSRRQCN 664

  Fly   421 KLRTGIKYSR------------VLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIH 473
            ..:..||..|            |...|.||.:|||||:.......|::..:.|| |..|:.|:..
Mouse   665 GPKANIKGDRRHVYTNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFP-EILDLAPFCT 728

  Fly   474 KDCK-----SEVAIYNLSSVICHHGTVGGGHYTCFAR-----------------------NTLNG 510
            ..||     |...:|:|..|:.|.||:..||||.:|:                       .:..|
Mouse   729 LKCKNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKG 793

  Fly   511 KWYEFDDQFVTEVSSELVQSCQAYVLFYHK 540
            :|:...|..|..|....|.:.|||:|||.:
Mouse   794 QWFHISDTHVQAVPITKVLNSQAYLLFYER 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 131/650 (20%)
Peptidase_C19 80..>204 CDD:271592 34/135 (25%)
Peptidase_C19R 307..538 CDD:239139 73/348 (21%)
DUSP 560..643 CDD:197831
DUSP 667..755 CDD:197831
Usp16NP_077220.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
zf-UBP 48..122 CDD:366940
UBP12 <135..823 CDD:227847 139/678 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..184 5/15 (33%)
Peptidase_C19K 196..>401 CDD:239132 43/209 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..456 13/69 (19%)
Peptidase_C19K <624..822 CDD:239132 52/198 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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