DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and Ggnbp1

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_081820.2 Gene:Ggnbp1 / 70772 MGIID:3055306 Length:370 Species:Mus musculus


Alignment Length:331 Identity:55/331 - (16%)
Similarity:94/331 - (28%) Gaps:149/331 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 VQSCQAYVLFYHKHNPQMKLVRDEAMTLSTSHPLCDSDIQFYITREWLSRLATFSEPGPINNQEM 592
            :..|.:.:.|..      .||..:..:.||:.||                  |.|:|.....|::
Mouse    12 ILGCSSMLRFLR------NLVGSKGGSKSTNKPL------------------TRSQPSSSWEQDV 52

  Fly   593 LCP----HGG--------ILHSKAD----------VISQIAVPISQPLWDYLYRTFGGGPAVNII 635
            :.|    .||        .:||.|.          |:|  |.| |.|..|              .
Mouse    53 VSPMMGHQGGRGRKEPRAKVHSAASSNGKREPPPRVLS--AAP-SNPRHD--------------A 100

  Fly   636 FECEICKRAAETLSRRQQYELNEFTKYNGLQNEFDSTAIYAIAMPWLRSWQQFSR---------- 690
            ||.......::||:.:...:|.             :..:...::|...:|:...:          
Mouse   101 FELGTGDSGSQTLTSKDVPKLR-------------AQGVEVTSVPLRGTWEVLEQLPEKKGEEEE 152

  Fly   691 ------GKTHKD----------------PGPIT---------NEGIAAPTENGSATVSCVRLGSD 724
                  |.:.::                |||:.         .|....|.|.|....|..::|| 
Mouse   153 PVGEVSGASDREHFGQALETEQGCLQWVPGPLALTPGAFIKEEEDEHCPIEFGDLKPSSCKVGS- 216

  Fly   725 YAQLNARLWRFLHNIY-------------GGGPEIILRQALSDEDDAEEIEIIDQ---------- 766
                  ..|.:|..:|             ...|::.|:..|..|:..|..|.:|:          
Mouse   217 ------TPWNYLLGLYKQLQKSAMAKAQRPAAPQLALKDGLPHEEKGEREEAVDESCPKWCAPRA 275

  Fly   767 --DDEC 770
              |:.|
Mouse   276 SSDESC 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 1/9 (11%)
Peptidase_C19 80..>204 CDD:271592
Peptidase_C19R 307..538 CDD:239139 1/9 (11%)
DUSP 560..643 CDD:197831 21/104 (20%)
DUSP 667..755 CDD:197831 19/141 (13%)
Ggnbp1NP_081820.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..114 25/122 (20%)
Required for induction of mitochondrial fragmentation 225..370 10/57 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..263 6/22 (27%)
Ubiquitin_3 281..368 CDD:291502 1/1 (100%)
Interaction with GGN 298..370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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