DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and usp20

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_009299732.1 Gene:usp20 / 393962 ZFINID:ZDB-GENE-040426-1219 Length:944 Species:Danio rerio


Alignment Length:799 Identity:326/799 - (40%)
Similarity:446/799 - (55%) Gaps:139/799 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SDSEGTDTAKG--SGTGLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRC 126
            :|.||:::.:.  ...||.|::||.|:||||:|||||||.||:|.:|.:||.||        |..
Zfish   163 ADEEGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLV--------RTD 219

  Fly   127 KPGGLAKSYRRLMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEE 191
            |...|.|||::|:.|:|.  .....::.|..:.:||:.|:||||||.|.||||||||.|||||||
Zfish   220 KKPALCKSYQKLISELWH--KKRPSYVVPTTLFHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEE 282

  Fly   192 LTEQVSMLPQTQNQPQYQ---SLQQQQPS-ETDDEN--DDEAAPASLSHASESEYDTCES-SMSE 249
            |.|           |.:.   .:.:.:|. ..|..|  |.:.:|      ||.|:.:|:| |.||
Zfish   283 LKE-----------PLFDCSGGISEVEPDLSLDSCNLVDGDRSP------SEDEFLSCDSGSGSE 330

  Fly   250 R--------SAEVLLKTEYFV-------------------------------------------- 262
            |        .||:|::.|...                                            
Zfish   331 RGDGERAGGEAELLIQDECVAVRGTGGISEKERLKERRGEERTREMDEDADVDTAAQDGQAERET 395

  Fly   263 ----------TPCRTNGSN-------SGLP--EGHSVQLQQAPLQHQQKNAS------------- 295
                      .|..|...|       |..|  ..||||...:.|......:|             
Zfish   396 ETATPATAVPAPGNTEPDNEASMHCPSSRPCSPAHSVQELHSRLSSNPPRSSPLRTGPTYTFKKA 460

  Fly   296 ----SAEQKPIEAARSIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTH 356
                |.::|.....||:|||:|||.:||.|||||||||||..|||||||||||.::.|..||.:.
Zfish   461 QMLLSTKKKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSSI 525

  Fly   357 SLSVQSLNAAETSARTNEGWLSWMWNMLR--------SWIYGPSVTLYDCMASFFSADELKGDNM 413
            ..|........|.....:||:|::.:.:|        ||.:||.|||.||:|:||:|||||||||
Zfish   526 HQSAPVKAGVCTDGYAAQGWISYIMDSIRRFVVSCIPSWFWGPMVTLEDCLAAFFAADELKGDNM 590

  Fly   414 YSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKS 478
            ||||||.|||.|:||.:||.|||:|||||||||:::.||.||:|.|.|||||.|::|::.|:..|
Zfish   591 YSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESPS 655

  Fly   479 EVAIYNLSSVICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFYHKHNP 543
            ::..|:|.||||||||.|.|||..:.:|.:||:|||||||:||||...:||:.:||||||.|.:.
Zfish   656 QITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSE 720

  Fly   544 QMKLVRDEAMTLSTSHPLCDSDIQFYITREWLSRLATFSEPGPINNQEMLCPHGGILHSKADVIS 608
            :.  ||:....::.::....|.:||||:||||::..||:|||||.|...||.||||..:|...:.
Zfish   721 ES--VRERQRVVALANLKEPSLLQFYISREWLNKFNTFTEPGPITNHTFLCQHGGIPPTKYHYVD 783

  Fly   609 QIAVPISQPLWDYLYRTFGGGPAVNIIFECEICKRAAETLSRRQQYELNEFTKYN-GLQNEFDST 672
            .:.|.:.|.:|:|||..||||||||.::.|.||:...|||::|::.|::.|.|.| ..|.|...|
Zfish   784 DLVVILPQNVWEYLYNRFGGGPAVNHLYVCAICQVEIETLAKRRKLEIDTFIKLNKEFQAEEAPT 848

  Fly   673 AIYAIAMPWLRSWQQFSRGKTHKDPGPITNEGIAAPTENGSATVSCVRLGSDYAQLNARLWRFLH 737
            .|..|:|.|.|.|:.|.:||.::.||||.|..||. .:.|...   ::.|:||.|::...|::|.
Zfish   849 VILCISMQWFREWENFVKGKDNEPPGPIDNSKIAV-MKGGHIQ---LKQGADYGQISEETWQYLL 909

  Fly   738 NIYGGGPEIILRQALSDED 756
            :||||||||.:||.:|..|
Zfish   910 SIYGGGPEIAVRQTISPPD 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 230/561 (41%)
Peptidase_C19 80..>204 CDD:271592 60/123 (49%)
Peptidase_C19R 307..538 CDD:239139 136/238 (57%)
DUSP 560..643 CDD:197831 41/82 (50%)
DUSP 667..755 CDD:197831 36/87 (41%)
usp20XP_009299732.1 zf-UBP 63..123 CDD:280334
UCH 180..715 CDD:278850 230/561 (41%)
Peptidase_C19 180..>285 CDD:271592 60/114 (53%)
Peptidase_C19R 476..716 CDD:239139 137/239 (57%)
DUSP 737..818 CDD:197831 41/80 (51%)
DUSP 843..927 CDD:197831 36/87 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 383 1.000 Domainoid score I782
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4861
Inparanoid 1 1.050 559 1.000 Inparanoid score I1067
OMA 1 1.010 - - QHG46045
OrthoDB 1 1.010 - - D147564at2759
OrthoFinder 1 1.000 - - FOG0003021
OrthoInspector 1 1.000 - - otm26093
orthoMCL 1 0.900 - - OOG6_103732
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6373
SonicParanoid 1 1.000 - - X2011
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.870

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