DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and Usp32

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_011247292.1 Gene:Usp32 / 237898 MGIID:2144475 Length:1618 Species:Mus musculus


Alignment Length:1017 Identity:207/1017 - (20%)
Similarity:339/1017 - (33%) Gaps:355/1017 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DSNASDSEGTDTAKGSGTGLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSAR 124
            :|:..|.....|.||:    .||.|:.|||:|||::|.:||..|:|.|||:...|.|      ..
Mouse   732 NSSKIDRHKVPTEKGA----TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE------LN 786

  Fly   125 RCKP----GGLAKSYRRLMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFM 185
            |..|    |.:||.|..|:||:|...   ::.:||..:.:.|....|.|.|:||.|:||.|...:
Mouse   787 RTNPIGMKGHMAKCYGDLVQELWSGT---QKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLL 848

  Fly   186 DQLHEELTEQVSMLPQTQNQPQYQSLQQQQPSETDDENDDEAAPASLSHASESEYDTCESSMSER 250
            |.|||:|.       :...:| |..|:     ::|...|.|.|..:..:                
Mouse   849 DGLHEDLN-------RVHEKP-YVELK-----DSDGRPDWEVAAEAWDN---------------- 884

  Fly   251 SAEVLLKTEYFVTPCRTNGSNSGLPEGHSVQLQQAPLQHQQKNASSAEQKPIEAARSIISDVFDG 315
                                                  |.::|            |||:.|:|.|
Mouse   885 --------------------------------------HLRRN------------RSIVVDLFHG 899

  Fly   316 KLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAAETSARTNEGWLSWM 380
            :|.|.|:|.||..:|.|.:.|..||||:|...::::     .::|..|:.. |..|         
Mouse   900 QLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHL-----EITVIKLDGT-TPIR--------- 949

  Fly   381 WNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYS------CERCNKLRTGIKYSRVLTLPEVLC 439
                    ||..:.:               |..|:      .:.|     |:|..::| ..||..
Mouse   950 --------YGLRLNM---------------DEKYTGLKKQLSDLC-----GLKSEQIL-FAEVHS 985

  Fly   440 IHLKRFRND-----LSYSSKISS-DVYFPLEGFDMRPYIHKDCKSEVAIYNLSSVICH------- 491
            .::|.|..|     ||.|..:.: ::..|.........|..||.|..:...|.::..:       
Mouse   986 SNIKNFPQDNQKVRLSVSGFLCAFEIPIPASPVSACSPIQTDCSSSPSTNGLFTLTTNGDLPRPI 1050

  Fly   492 -------HGTVGGGHYTCFARNTLNGKWYEF-DDQFVTEVSSELVQSCQAYVLFYHKHNPQMKLV 548
                   :..|..|.........:||..... ||.|.            .|::..|:     |::
Mouse  1051 FIPNGMPNTVVPCGTEKNVTNGIVNGHMPPLPDDPFT------------GYIIAVHR-----KMM 1098

  Fly   549 RDEAMTLSTSH--------PL---CDSDIQFYITRE-------WL--SRLATFSEPGPINNQEM- 592
            |.|...||:..        ||   |...     ||:       |:  ||||:...|...:|... 
Mouse  1099 RTELYFLSSQKNRPSLFGMPLIVPCTVH-----TRKKDLYDAVWIQVSRLASPLPPQEASNHAQD 1158

  Fly   593 ------------------------LCP-----HGGILHSKAD--VISQIAVPISQPLWD-----Y 621
                                    .||     .|..:....|  .|....:.:.   ||     .
Mouse  1159 CDDSMGYQYPFTLRVVQKDGNSCAWCPWYRFCRGCKIDCGEDRAFIGNACIAVD---WDPTALHL 1220

  Fly   622 LYRTFGGGPAVNIIFECEICKRAAETLSRRQQYE-------LNEFTKYNGL-QNEF---DSTAIY 675
            .|:|    ....::.|.|..::     |||.|.|       |..||....| :||.   .....:
Mouse  1221 RYQT----SQERVVEEHESVEQ-----SRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTH 1276

  Fly   676 AIAMPWLRSWQ------------QFSRGKTHKDPGPITNEGIAAPTENGSATVSCVRLGSDYAQL 728
            .:|...|..|:            ||..|:..|     :.:.:..|.|  |...|...:..|    
Mouse  1277 CLATKKLDLWRLPPILIIHLKRFQFVNGRWIK-----SQKIVKFPRE--SFDPSAFLVPRD---- 1330

  Fly   729 NARLWRFLHNIYGGGPEIILRQALSDE-DDAEEIEIIDQDDECDDDEDQDLEGEGEDEEIAAASY 792
                           |.:...:.|:.: ||..|:.|     ...|.:..|::....:|::..:. 
Mouse  1331 ---------------PTLCQHKPLTPQGDDFSELRI-----PAGDVKKVDIQSSAGEEDVLLSK- 1374

  Fly   793 QHNHSDTESNLGIRNTPSPSPSTSPSPSLTGTRQPMETESDLRPSSSKSKRSRSKMKVSALRLNM 857
                |.:..:..:.::|..|||:|..   :|...|....|.  |:||.....|:|.::...::..
Mouse  1375 ----SPSSLSANVTSSPKGSPSSSRK---SGASCPSSKNSS--PNSSPRTLGRNKGRLRLPQIGS 1430

  Fly   858 RNR---GKRNRSAFK-----QYAEMFGAKGNYNAHSNAEPVVSEKDEKDKDNDRTVAFPSEYSLP 914
            :|:   .|.|....|     |..|:.......:....::|              .:..|.::.:.
Mouse  1431 KNKLSNSKENLDTSKENGAGQICELADTLNRRHVLGGSQP--------------ELVTPLDHEIT 1481

  Fly   915 ISIPFQSDNFQVNGVHE---KSRDKGKLRNSSKSGSTAATKE 953
            ::..|..:       ||   .....|:|.|.|:..||...:|
Mouse  1482 LANGFLYE-------HEACGNGYSNGQLGNHSEEDSTDDQRE 1516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 109/489 (22%)
Peptidase_C19 80..>204 CDD:271592 46/127 (36%)
Peptidase_C19R 307..538 CDD:239139 53/257 (21%)
DUSP 560..643 CDD:197831 23/131 (18%)
DUSP 667..755 CDD:197831 16/102 (16%)
Usp32XP_011247292.1 FRQ1 189..339 CDD:227455
UBP12 518..1330 CDD:227847 165/774 (21%)
UCH <1248..1578 CDD:366104 59/331 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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