DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and Usp11

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_663603.3 Gene:Usp11 / 236733 MGIID:2384312 Length:921 Species:Mus musculus


Alignment Length:685 Identity:152/685 - (22%)
Similarity:242/685 - (35%) Gaps:237/685 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKP----GGLAKSYRRL 138
            |:.||.|:.|||:||||||.|||:|.:|.||:|    ..|:.|.:.|  .|    |.||::|..|
Mouse   255 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLN----NRYLEELNFR--NPLGMKGELAEAYADL 313

  Fly   139 MQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEELT-----EQVSM 198
            :::.|...   ...|.|......:......|.||||||:||.|...:|.|||:|.     |.|.:
Mouse   314 VKQTWSGY---HRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVEL 375

  Fly   199 LPQTQNQPQYQSLQQQQPSETDDENDDEAAPASLSHASESEYDTCESS----------------- 246
            .    |......|:..|.:..:.:..:::......|........|...                 
Mouse   376 C----NGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 436

  Fly   247 --MSERSAEVLLKTEYFV--TPCRTNGSNSGLPEGHSVQLQQAPLQHQQKNASS-----AEQKPI 302
              .|.|..||     :||  .|.|.       ||.|.|.:.      ::.|.|.     :....:
Mouse   437 PVCSRRVLEV-----FFVPMDPRRK-------PEQHRVVVP------KKGNISDLCVALSTHTSV 483

  Fly   303 EAARSIISDVFDGKLLSSVQ-------CLTCD---------RVSTREETFQDLSLPI------PN 345
            ...:.|::|||..:.....|       .|..|         |:...|.:..|:.:|:      |:
Mouse   484 APDKMIVADVFSHRFYKLYQLEDPLSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPS 548

  Fly   346 RDFLN------------------------------------------------------------ 350
            ||:.|                                                            
Mouse   549 RDYNNSYYGLILFGHPLLVSVPRDRFSWEGLYNILMYRLSRYVTKPTSDEDDGDEKVDEDEDEDV 613

  Fly   351 -----------------------------------VLHQTHSL--------------------SV 360
                                               |..:..||                    ::
Mouse   614 EDDSSSEEEKEEMSAPTVNDGTREAEQEQAGTSSGVTERCPSLLDNSLRASQWPPRRRRKQLFTL 678

  Fly   361 QSLNAAETSART-------NEGWLSWMW--NMLRSW------------------IYGPSVTLYDC 398
            |::|:..||.||       .:.:::..|  :|.|.:                  :....|.|.:|
Mouse   679 QTVNSNGTSDRTTSPEEMQTQPYIAMDWEPDMKRRYYDEVEAEGYVKHDCVGYMLKKSPVQLKEC 743

  Fly   399 MASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPL 463
            :..|.:.:.|:.:|.:.|..|.:.:...|...:..|||||.||||||........|:.:.|.||:
Mouse   744 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPI 808

  Fly   464 EGFDMRPYIHK---DCKSEVAIYNLSSVICHHGTVGGGHYTCFARNTLNGKWYEFDDQFVTEVSS 525
            ...|...::.|   :...::..|:|.:|..|:|.:..||||.||.|..:|:|:.|||..|:.|:.
Mouse   809 RDLDFSEFVIKPKNESSPDLYKYDLIAVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNE 873

  Fly   526 ELVQSCQAYVLFYHKHNPQMKLVRDEAMTLSTSHP 560
            ..::|..||||||.:.:    :.|.::.|.|:..|
Mouse   874 NQIESKAAYVLFYQRQD----VGRRQSQTSSSDTP 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 145/660 (22%)
Peptidase_C19 80..>204 CDD:271592 49/132 (37%)
Peptidase_C19R 307..538 CDD:239139 77/397 (19%)
DUSP 560..643 CDD:197831 1/1 (100%)
DUSP 667..755 CDD:197831
Usp11NP_663603.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
UBP12 23..888 CDD:227847 148/663 (22%)
DUSP 44..136 CDD:197831
Ubiquitin_3 154..233 CDD:291502
Peptidase_C19 <254..>370 CDD:271592 48/123 (39%)
Peptidase_C19 258..>437 CDD:271592 54/191 (28%)
USP7_C2 428..>541 CDD:291217 25/130 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 593..668 3/74 (4%)
Peptidase_C19R <737..887 CDD:239139 51/149 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 893..921 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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