DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and Usp43

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_776115.2 Gene:Usp43 / 216835 MGIID:2444541 Length:1132 Species:Mus musculus


Alignment Length:1205 Identity:259/1205 - (21%)
Similarity:388/1205 - (32%) Gaps:431/1205 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHTLANGYAMGDPRSSRCHDKLFSGSLKSLARREDSNAS-------------DSEG--------- 68
            |:.|..|.....||..|...:|.:..|.:|..|..|..|             |.||         
Mouse     6 GNALGEGPPAPRPRRRRSLRRLLNRFLLALGSRSRSGDSPPRPPAQPSPYDGDGEGGFACAPGPA 70

  Fly    69 ----------------TDTAKGSGT---GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDL 114
                            ...:.|.|.   |..||:|..|||:||:.:|.|||           :||
Mouse    71 PASAGSPGPDRPPGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLSN-----------TDL 124

  Fly   115 VEYIAEQSARRCKPG--GLAKSYRRLMQEIWQDVDDP------KEFIAPRGILYGIRTVHPMFRG 171
            :.........|..||  .:.:....|::.:|.....|      |..::..|         ..|:|
Mouse   125 LAEFLALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYG---------SQFQG 180

  Fly   172 YQQHDTQEFLRCFMDQLHEELTEQVSMLPQTQNQPQYQSLQQQ-QPSETDDENDDEAAPASL--- 232
            ..|||..|||...:|::||:|......|...|..|:...:.:. :||         |||.||   
Mouse   181 NSQHDALEFLLWLLDRVHEDLEGSAHGLVSEQLPPEVSKISEDLRPS---------AAPTSLGPS 236

  Fly   233 ---SHASESEYD---TCE---------------------------------SSMSER-------- 250
               || .:::|.   ||.                                 .|.|:|        
Mouse   237 FVQSH-FQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAV 300

  Fly   251 --------------------SAEVLL--------KTEYF------------------VTPCRTNG 269
                                :.||:|        :..:|                  |.|....|
Mouse   301 PILSTVAALRKMVAEEGGVPAEEVILVELYPNGFQRSFFDEEDLNTIAEGDNVYAFQVPPSPGLG 365

  Fly   270 SNSGLPEGHSV---------QLQQAPLQHQQK------NASSAEQKP--------IEAARSIISD 311
            :.|..|.|.||         |....||..:.:      |...:.|:.        |...|:|...
Mouse   366 TLSAHPSGLSVSPRLPVRDSQRFSGPLHSENRVVFLFCNLVGSGQQASRFGPPFLIREDRTISWA 430

  Fly   312 VFDGKLLSSVQCLTCDRVSTREETFQDLSL-----------------PIPNRDFLN-----VLH- 353
            .....:||.|:||....||.     |||..                 |..||...:     .|| 
Mouse   431 QLQQCILSKVRCLMRSEVSA-----QDLGTLFSIRVVGLSLACSYLSPKDNRPLCHWAVDRALHL 490

  Fly   354 -------------QTHSLSVQSLNAAETSARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSA 405
                         :..|...:.|..:....|..:....|.......   .||.||.:|..|:...
Mouse   491 RRPGGPPHVKLAVEWDSSVTERLFGSLQEERVQDADSVWRQQQAHQ---QPSCTLDECFQSYTKE 552

  Fly   406 DELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRP 470
            ::|..|:.:.|..|..|:.|:....:.|||::|.||||||.......:|:|:.|.|||.|.:|.|
Mouse   553 EQLAQDDAWKCPHCQVLQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSGLNMAP 617

  Fly   471 YIHKDCKSEVA----------------------IYNLSSVICHHGTVGGGHYTCFARNTLNGKWY 513
            ::.:...:..|                      :|:|.:|..|||::.|||||.:.||:|:|:||
Mouse   618 HVARRSTNSKAGPGPWSSWKQPICLPTTYPLDFLYDLYAVCNHHGSLQGGHYTAYCRNSLDGQWY 682

  Fly   514 EFDDQFVTEVSSELVQSCQAYVLFYHKHNPQMKLVRDEAMTLSTSHPLCDSDIQFYITREWLSRL 578
            .:||..|..:..:.|.:..||:|||.|.|.........:|..|||..|.|         .||.||
Mouse   683 SYDDSTVEALREDEVNTRGAYILFYQKRNSIPPWSASSSMRGSTSSSLSD---------HWLMRL 738

  Fly   579 ATFSEPGPINNQ---EML------CPH-----------GGILH-SKADV-------------ISQ 609
                  |.:||.   .:|      ||.           .|:.| .|..|             ||.
Mouse   739 ------GSLNNSTRGSLLSWSSAPCPSMARVPDSPVFTNGVCHQDKGGVETRPLVRGVGGRSISM 797

  Fly   610 IAVPISQ---------PL-WDYLYRTFGGGPAVNIIFECEICKRAAETLSRRQQYELNEFTKYNG 664
            .|.|.|:         || |.:.:|....|.:|.::...|..:|...|                 
Mouse   798 KASPASRSRHGPFKTMPLRWSFGHREKRPGASVELVEYLESRRRPRST----------------- 845

  Fly   665 LQNEFDSTAIYAIAMPWLRSWQQFSRGKTHKDPGPITNEGIAAPTEN-----GSATVSCVRLGSD 724
                  |.:|    :|.|..    :.|.......|.::..:.|.:|:     |..|.. |.|.| 
Mouse   846 ------SQSI----VPLLTR----AAGGEETSASPRSDGTLPAKSEDSGRAIGQGTTG-VPLSS- 894

  Fly   725 YAQLNARLWRFLHNIYGGGPEIILRQALSDEDDA-----EEIEIIDQDDECDDDEDQDL---EGE 781
             ..||       |:           .||...||:     .....:.||.......|..|   ...
Mouse   895 -CHLN-------HH-----------PALGSLDDSLHTARTRTGNVSQDIRLPKKFDLPLTVMPSV 940

  Fly   782 GEDEEIAAASYQHNHSDTESNLGIRNTPSPSPSTSPSPSLTGTRQPMETESDLRPSSSKSKRSRS 846
            |:::.......:.......|.:|.:::| |||||.          .:....|..|.:....:|::
Mouse   941 GDEKPARPEGQKMTPWKGSSQVGSQSSP-PSPSTG----------LLRNFKDSGPGTLPKMKSKA 994

  Fly   847 KMKVSALRLNMRNRGKRNRSAFKQYAEMFGAKGNYNAHSNAEPVVSEKDEKDKDNDRTVAFPSEY 911
            .|:.   |...::||:...:..|.                   |..:|:.|     |||...|..
Mouse   995 AMEE---RAPDKDRGQGTFTLLKS-------------------VFWKKEHK-----RTVRTESSP 1032

  Fly   912 SLPISIPFQSDNFQVNGVHEKSRDKGKLRNSSKSG 946
            ..| .|...||......::|::.   ::|.|...|
Mouse  1033 PAP-PISLGSDRLSPAAMNEQAL---RIRESPAKG 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 147/644 (23%)
Peptidase_C19 80..>204 CDD:271592 35/131 (27%)
Peptidase_C19R 307..538 CDD:239139 76/288 (26%)
DUSP 560..643 CDD:197831 28/126 (22%)
DUSP 667..755 CDD:197831 18/92 (20%)
Usp43NP_776115.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 18/96 (19%)
Peptidase_C19 102..>284 CDD:271592 49/211 (23%)
Peptidase_C19 102..>197 CDD:271592 31/114 (27%)
Peptidase_C19R <536..708 CDD:239139 57/174 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 839..891 12/83 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 935..1008 16/86 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1044 8/20 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1057..1106 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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