DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and usp49

DIOPT Version :10

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_002933022.1 Gene:usp49 / 100488823 XenbaseID:XB-GENE-976521 Length:686 Species:Xenopus tropicalis


Alignment Length:543 Identity:133/543 - (24%)
Similarity:200/543 - (36%) Gaps:203/543 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINC--SDLVEYIAE---QSARRCKPGG------- 130
            |:.||:|:.|||||||.||.||:|......|:..  |:..|.:|.   ...||....|       
 Frog   254 GVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDPSEKEELLARTGTNGKRRVGDAGGGHPVGG 318

  Fly   131 --------LAKSYRRLMQEIWQDVDDPKE-------------------------FIAPRGILYGI 162
                    :.||. .|:|        |||                         .::|..:|:.:
 Frog   319 IGLNGGSSITKSL-ELIQ--------PKEPSTKHLSLCHELHTLFRVMWSGKWALVSPFAMLHSV 374

  Fly   163 RTVHPMFRGYQQHDTQEFLRCFMDQLHEELTEQVSMLPQTQNQPQYQSLQQQQPSETDDENDDEA 227
            .::.|.||||.|.|.||||...:|::.:||                                   
 Frog   375 WSLIPAFRGYDQQDAQEFLCELLDKVQQEL----------------------------------- 404

  Fly   228 APASLSHASESEYDTCESSMSERSAEVLLKTEYFVTPCRTNGSNSGLPEGHSVQLQQAPLQHQQK 292
                            ||..|:|  .:|:                             |:     
 Frog   405 ----------------ESEGSKR--RILI-----------------------------PI----- 417

  Fly   293 NASSAEQKPIEAARSIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHS 357
                :::|..:....:::.:|.|:|||.|.||.|...|...|.|.||||..|.|      :.:..
 Frog   418 ----SQRKLTKQVLKVVNTIFHGQLLSQVTCLKCSYKSDTVEPFWDLSLEFPER------YHSQE 472

  Fly   358 LSVQSLNAAETSARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNK- 421
            ..:..:...|                         .||.:.:|.|...:.|:| .:|:|::||. 
 Frog   473 KGIAPVTTTE-------------------------CTLTEMLAKFTETEALEG-RIYACDQCNSK 511

  Fly   422 ----------LRTGIKYSRVLTLPEVLCIHLKRFR-NDLSYSSKISSDVYFPLEGFDMRPYIHKD 475
                      |....|...:..||:||.:|||||| :..::..||...|:|. :..:|.||    
 Frog   512 RRKSSPKPLVLSEAKKQLMIFRLPQVLRLHLKRFRWSGRNHREKIGVHVFFD-QVLNMEPY---- 571

  Fly   476 CKS-------EVAIYNLSSVICHHGT-VGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQ 532
            |:|       |..:|:||:|:.|||. .|.||||.:..||..|.|...:|..:...|.|.|...|
 Frog   572 CRSVLPPSNPEAYLYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNMCSVEEVCRTQ 636

  Fly   533 AYVLFY-HKHNPQMKLVRDEAMT 554
            ||:||| .:.|.|..:..::..|
 Frog   637 AYILFYTQRSNTQNSVHGNKTQT 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 80..538 CDD:425685 127/522 (24%)
DUSP 560..643 CDD:197831
DUSP 667..755 CDD:197831
usp49XP_002933022.1 zf-UBP 26..87 CDD:460464
MAP7 144..>197 CDD:461709
CAMSAP_CC1 <165..>188 CDD:465344
UCH 256..642 CDD:425685 127/522 (24%)
Blue background indicates that the domain is not in the aligned region.

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