DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp20-33 and usp20

DIOPT Version :9

Sequence 1:NP_610943.2 Gene:Usp20-33 / 36580 FlyBaseID:FBgn0033916 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_012823238.1 Gene:usp20 / 100036606 XenbaseID:XB-GENE-966528 Length:932 Species:Xenopus tropicalis


Alignment Length:870 Identity:343/870 - (39%)
Similarity:474/870 - (54%) Gaps:147/870 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YVEHRNRTIHS-SQGHTLANG--------YAMG-----DPR--------SSRCHDKLFSGS---L 52
            ||:|  .|:|: ::.|.|...        ||..     |||        |.|...:.|..|   |
 Frog   105 YVDH--STLHAQAKKHNLTVNLTTFRVWCYACEKEVFLDPRGPPASQTTSPRLSHRDFPTSAHPL 167

  Fly    53 KS--LARREDSNASDSEGTDTAKGSGTGLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLV 115
            ||  :|..:|..:...|  |..|  ..||.|::||.|:||||:|||||||.||:|.:|:.|..||
 Frog   168 KSVPIAVGDDGESESDE--DDIK--PRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLECGGLV 228

  Fly   116 EYIAEQSARRCKPGGLAKSYRRLMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEF 180
                    |..|...|.|||::|:.|:|.  .....::.|..:.:||:.::|:||||.|.|||||
 Frog   229 --------RTDKKPALCKSYQKLISELWH--KKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEF 283

  Fly   181 LRCFMDQLHEELTEQVSMLPQTQNQ---------------------------------------- 205
            |||.||||||||.|.|.:..|.:.:                                        
 Frog   284 LRCLMDQLHEELKEPVPLETQEREEEDRDDQREGERGGTVEEDFLSCDSGGEMGDGEGGGGVGTL 348

  Fly   206 ---------------PQYQSLQQQQPS----ETDDENDDEAAPASLSHASESEYDT---CES-SM 247
                           .:.:.|::::.|    .|..|..||.|....:...|.:.|.   |.| |.
 Frog   349 SEMELLIREEVGRGLSEKEKLKERKLSYCHRRTSSEQADEDADVDTAMIPEPDNDAYVHCSSRSC 413

  Fly   248 SERSAEVLLKTEYFVTPCRTNGSNSGLPEGHSVQLQQAPLQHQQKNASSAEQKPIEAARSIISDV 312
            |....|.:.|  :..||.|    :|.|...||..|::|.:....|..|....      ||:|||:
 Frog   414 SPHPVESISK--HSSTPPR----SSPLRTSHSYVLKKAQVLSGGKKRSEVRY------RSVISDI 466

  Fly   313 FDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQT-HSLSVQSLNAAETSARTNEGW 376
            |||.:||.|||||||||||..|||||||||||.::.|..||.| |..:|........|... :||
 Frog   467 FDGSILSLVQCLTCDRVSTTIETFQDLSLPIPGKEDLAKLHSTIHQSAVSKAGTCGDSYAA-QGW 530

  Fly   377 LSWMWNMLR--------SWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLT 433
            ||:..:.:|        ||.:||.:||.||:|:||:|||||||||||||||.|||.|:||.:||.
 Frog   531 LSFFMDYIRRFVVSCIPSWFWGPMITLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLR 595

  Fly   434 LPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVAIYNLSSVICHHGTVGGG 498
            |||:|||||||||:::.||.||.|.|.|||||.::||::.|:|.|.:..|:|.:||||||:...|
 Frog   596 LPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSASSG 660

  Fly   499 HYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFYHKHNPQMKLVRDEAMTLSTSHPLCD 563
            ||..:.:|.:||:|||||||:||||...:||:.:||||||.|.:.:.:..|.:.::|:.   :.:
 Frog   661 HYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEEAERERQKVVSLAA---MKE 722

  Fly   564 SD-IQFYITREWLSRLATFSEPGPINNQEMLCPHGGILHSKADVISQIAVPISQPLWDYLYRTFG 627
            |. :||||:||||::..||:||||||||..||.||||..:|...|..:.|.:.|.:|:|||..||
 Frog   723 SGLLQFYISREWLNKFNTFAEPGPINNQSFLCSHGGIPPNKYHYIDDLVVILPQSVWEYLYNRFG 787

  Fly   628 GGPAVNIIFECEICKRAAETLSRRQQYELNEFTKYN-GLQNEFDSTAIYAIAMPWLRSWQQFSRG 691
            ||||||.::.|.||:...|.|::|::.|::.|.|.| ..|.|...:.||.|:|.|.|.|:.|.:.
 Frog   788 GGPAVNHLYVCSICQVEIEALAKRRKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVKA 852

  Fly   692 KTHKDPGPITNEGIAAPTENGSATVSCVRLGSDYAQLNARLWRFLHNIYGGGPEIILRQALSDED 756
            |....||||.|..:|....:|...   ::.|:||.|::...|.:|.|:|||||||.:||.::...
 Frog   853 KDSDPPGPIDNSKVALTKSSGQVQ---LKQGADYGQISEETWNYLLNVYGGGPEIAIRQTVAQYQ 914

  Fly   757 DAEEIEIIDQDDECDDDEDQDLEGE 781
            :||.:.           .:|.:|.|
 Frog   915 EAEHLH-----------GEQKIEAE 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp20-33NP_610943.2 UCH 79..538 CDD:278850 223/530 (42%)
Peptidase_C19 80..>204 CDD:271592 59/123 (48%)
Peptidase_C19R 307..538 CDD:239139 136/239 (57%)
DUSP 560..643 CDD:197831 44/83 (53%)
DUSP 667..755 CDD:197831 33/87 (38%)
usp20XP_012823238.1 UBP14 51..>311 CDD:227532 85/221 (38%)
UCH 193..700 CDD:366104 222/529 (42%)
DUSP 720..803 CDD:197831 44/82 (54%)
DUSP 828..912 CDD:197831 33/86 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 394 1.000 Domainoid score I762
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4861
Inparanoid 1 1.050 577 1.000 Inparanoid score I1024
OMA 1 1.010 - - QHG46045
OrthoDB 1 1.010 - - D147564at2759
OrthoFinder 1 1.000 - - FOG0003021
OrthoInspector 1 1.000 - - otm48952
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6373
SonicParanoid 1 1.000 - - X2011
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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