DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and KSP1

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_011950.1 Gene:KSP1 / 856482 SGDID:S000001124 Length:1029 Species:Saccharomyces cerevisiae


Alignment Length:1014 Identity:194/1014 - (19%)
Similarity:346/1014 - (34%) Gaps:334/1014 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTL--ETQPVGGVSDGKIAGLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDK---------- 53
            |||  |....||:.:.:...:.|:.|    |.:..|.||:.|.....||||.:.|          
Yeast     1 MTLDYEIYKEGGILNNRYQKIEDISE----GSYGYVSLAKDVREKRLVAVKYIFKLEDDGQYDGP 61

  Fly    54 -----------------TKLDD------------------VSKAHLFQEVR-------------- 69
                             ||:|.                  ..|.:|::..:              
Yeast    62 QDDENDCDSSDCDDDEDTKVDTDRHENENGNASSNNGSSREKKHNLYKHKKSLISSKVKSRLSNN 126

  Fly    70 -CM----------KLVQHPNVVRLYEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKY 123
             |:          |:.:|.|:..|.:..|:    |:::|...|||||:.|.........:.....
Yeast   127 ICLEAMYEVDIQTKIGRHQNIAALLDFFDS----YIIMEYCSGGDLYEAIKADAVPKKTKSITHI 187

  Fly   124 FRQILRAITYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPE 188
            ..||:.||.|.|...:.|||:||||::.......:||||:|.:.  .....::...||..|.:||
Yeast   188 ITQIMDAIEYVHNKGIYHRDIKPENILISGIDWTIKLTDWGLAT--TDKTSMDRNVGSERYMSPE 250

  Fly   189 ILLGDS----------YDAPAVDIWSLGVILYMLVCGQAPFEKANDSET----LTMIMDCKYTVP 239
            :.  ||          ||...||:|::|::...:|..:.||..||.|:.    .....:..:.|.
Yeast   251 LF--DSNLDIKERKEPYDCAKVDLWAMGIVFLNIVFHKNPFSIANQSDKSFCYFAANREALFDVF 313

  Fly   240 SHVSTDCRDLIASMLVRDPKKRATVEEIASSAWLKPIDEPDSTTSTSEHFLPLVSREQLGEEDHA 304
            |.::.|...::...|..||..|..                                         
Yeast   314 STMAYDFFQVLRYSLTIDPANRDL----------------------------------------- 337

  Fly   305 FIIQKMINGNIASKEEILQALDKNKYNHITATYFLLAELRLRRRREELAQKQRLLNDASMKVGDA 369
                ||:...:.:..|  ..||...||::...|                       :.:|..|  
Yeast   338 ----KMMRTELQNLSE--YTLDDEYYNNLDEGY-----------------------EETMIDG-- 371

  Fly   370 SRKLVPEKPSPTEAQKGGVPISINVTPAAQFANDGGKPD-KRSRKCSIVREEDEEESATECTAVG 433
                :|.:|.|..:    .|:|: .||.:. :|....|: |:....:.|.|....:.:.......
Yeast   372 ----LPPQPVPPSS----APVSL-PTPISS-SNKQHMPEFKKDFNFNNVNERKRSDVSQNQNVAS 426

  Fly   434 NELKVTSSSRREAFSDS-PFSRSIHERSSSEPGNQTKGEQIANSGVPSHSRTKIVVSVDATLAHK 497
            ...|..|:.:::.|:.. ..:.|.|||:.|.|                              ..|
Yeast   427 GFFKKPSTQQQKFFNQGYNTTLSTHERAKSAP------------------------------KFK 461

  Fly   498 LKQMEKSAKIDEDTLSGLKELEIGKLKPLPSSSKNPVLTHRRTKLNKIRTPSCSSSE-----ASD 557
            .|:..|..:.|.         :..|...:....|:.:|...|..|. |.||:...:.     .:.
Yeast   462 FKKRNKYGRTDN---------QFSKPVNIEDRKKSKILKKSRKPLG-IPTPNTHMNNFFHDYKAR 516

  Fly   558 DDTKTRN--------KKKINKFVGDTPVRFRMHRRDSHDDSSDSQDQLYPPPGSASNAGNFISKS 614
            |:..||:        .:.:..|..:...::|.:|..::::::.:.:.       .||..||.:.:
Yeast   517 DEFNTRDFFTPPSVQHRYMEGFSNNNNKQYRQNRNYNNNNNNSNNNH-------GSNYNNFNNGN 574

  Fly   615 GSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKHSHAERQLADSSTATTGNS---- 675
            ..:.|..:..::|:.|::.|...:...|:.|...::.::...:.:|.|    .||.|..:|    
Yeast   575 SYIKGWNKNFNKYRRPSSSSYTGKSPLSRYNMSYNHNNNSSINGYARR----GSTTTVQHSPGAY 635

  Fly   676 ------------TNRRRRIRESQSLDRIT------EAQEYEMRHRCYAESEAASSSSSSTQHIDQ 722
                        ||:..|:.:|.:.|..|      ..||:      |.:....|.....:..:  
Yeast   636 IPPNARNHHVSPTNQFLRVPQSTAPDISTVLGGKPSYQEH------YTQDSMDSEGDHDSDDV-- 692

  Fly   723 RYSLLSLNTSTFSVAETKEEYDEEADATNATDQIMNTLNAAKATLQQEQYFNNNTNLSRNFNHNH 787
                      .|::.|...::....|..:..|.:.:|...:    ..|.:.:.:||.:.|.|:||
Yeast   693 ----------LFTLEEGDHDFVNGMDNLSINDHLPHTTVGS----HNEVFVHASTNHNNNGNNNH 743

  Fly   788 -------NQ-----------SIIHISSQKANGKKSNETPKDI----------YNLNSIEHIDLIL 824
                   ||           :.:||::   |..:|||.| |:          .||:| ..||.||
Yeast   744 IDTNSTTNQYHRQYIPPPLTTSLHINN---NNNESNELP-DLLKSPASSEAHLNLSS-GPIDPIL 803

  Fly   825 EDKSLTKAIHVTGSKCFVTMKKIRRL--------GKYFP 855
            ......:..|.:.||   .:::.|||        |.|.|
Yeast   804 TGNIGNRYSHSSDSK---ELEQERRLSMEQKFKNGVYVP 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 75/340 (22%)
UBA_SNRK 296..338 CDD:270524 7/41 (17%)
KSP1NP_011950.1 STKc_Pat1_like 17..348 CDD:270895 77/387 (20%)

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