DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and CIPK23

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_564353.1 Gene:CIPK23 / 839907 AraportID:AT1G30270 Length:482 Species:Arabidopsis thaliana


Alignment Length:443 Identity:139/443 - (31%)
Similarity:213/443 - (48%) Gaps:72/443 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PVGGVSDGKI-AGLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTK-LDDVSKAHLFQEVR 69
            |.|..|.|:. .|.|:|..|||.|.||.||.||:|..|..||:||:||.| |.:...|.:.:|:.
plant    17 PSGSSSGGRTRVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREIS 81

  Fly    70 CMKLVQHPNVVRLYEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYC 134
            .|||::||||:|::||:.::||:|.|||...||:|:|.| ..:..|.|:.|||||:|::.|:.||
plant    82 TMKLIKHPNVIRMFEVMASKTKIYFVLEFVTGGELFDKI-SSNGRLKEDEARKYFQQLINAVDYC 145

  Fly   135 HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFLPGQ-----KLETFCGSLAYSAPEILLGDS 194
            |...|.||||||||:: .:..|.:|::|||.|  .||.|     .|.|.||:..|.|||::....
plant   146 HSRGVYHRDLKPENLL-LDANGALKVSDFGLS--ALPQQVREDGLLHTTCGTPNYVAPEVINNKG 207

  Fly   195 YDAPAVDIWSLGVILYMLVCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPK 259
            ||....|:||.||||::|:.|..|||.:|.:.....|...::|.|...|...:.||..:|..:|.
plant   208 YDGAKADLWSCGVILFVLMAGYLPFEDSNLTSLYKKIFKAEFTCPPWFSASAKKLIKRILDPNPA 272

  Fly   260 KRATVEEIASSAWLK-------------PIDEPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMI 311
            .|.|..|:..:.|.|             .:|:.|:....|            ||..:..:.::  
plant   273 TRITFAEVIENEWFKKGYKAPKFENADVSLDDVDAIFDDS------------GESKNLVVERR-- 323

  Fly   312 NGNIASKEEILQALDKNKYNHITATYFLLAELRLRRRREELAQKQRLLNDAS------------- 363
                  :|.:...:..|.:..|:.:..|.......::...:.:|.|..:.:|             
plant   324 ------EEGLKTPVTMNAFELISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAA 382

  Fly   364 -----MKVGDASRKLVPEKPSPTEAQKGGVPISINVTPAA------QFANDGG 405
                 :|..:...||..||    ..:||.:.::..|...|      :....||
plant   383 PMGFDVKTNNYKMKLTGEK----SGRKGQLAVATEVFQVAPSLYMVEMRKSGG 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 110/263 (42%)
UBA_SNRK 296..338 CDD:270524 5/41 (12%)
CIPK23NP_564353.1 STKc_SnRK3 30..285 CDD:271133 109/258 (42%)
CIPK_C 334..449 CDD:213380 17/102 (17%)

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