DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and KIN11

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_566843.1 Gene:KIN11 / 822566 AraportID:AT3G29160 Length:512 Species:Arabidopsis thaliana


Alignment Length:335 Identity:129/335 - (38%)
Similarity:199/335 - (59%) Gaps:25/335 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVS-KAHLFQEVRCMKLVQHPNVVRLY 83
            |.|.:|||.|.|..||:|.||.||.|||:|::::.|:.::. :..:.:|::.::|..||:::|.|
plant    20 YKLGKTLGIGSFGKVKIAEHVVTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRQY 84

  Fly    84 EVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPEN 148
            |||:|.:.:|:|:|....|:|:|||:: ...|.|:.||.:|:||:..:.|||:..||||||||||
plant    85 EVIETTSDIYVVMEYVKSGELFDYIVE-KGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPEN 148

  Fly   149 VVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLV 213
            ::...:.. :|:.|||.||....|..|:|.|||..|:|||::.|..|..|.||:||.|||||.|:
plant   149 LLLDSRCN-IKIADFGLSNVMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALL 212

  Fly   214 CGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIASSAWLK---- 274
            ||..||:..|.......|....||:|||:|::.||||..||:.||.||.|:.||....|.:    
plant   213 CGTLPFDDENIPNLFKKIKGGIYTLPSHLSSEARDLIPRMLIVDPVKRITIPEIRQHRWFQTHLP 277

  Fly   275 ---PIDEPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMINGNIASKEEILQALDKNKYNHITAT 336
               .:..||:....          :::.||    |:|:::|... .:.::|::|.....|..|.|
plant   278 RYLAVSPPDTVEQA----------KKINEE----IVQEVVNMGF-DRNQVLESLRNRTQNDATVT 327

  Fly   337 YFLLAELRLR 346
            |:||.:.|.|
plant   328 YYLLLDNRFR 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 111/253 (44%)
UBA_SNRK 296..338 CDD:270524 10/41 (24%)
KIN11NP_566843.1 STKc_AMPK_alpha 17..272 CDD:270981 111/253 (44%)
UBA_SnRK1_plant 294..334 CDD:270520 13/44 (30%)
AMPKA_C 391..509 CDD:213378
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.