DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Prkaa2

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_076481.2 Gene:Prkaa2 / 78975 RGDID:620893 Length:552 Species:Rattus norvegicus


Alignment Length:646 Identity:183/646 - (28%)
Similarity:274/646 - (42%) Gaps:162/646 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DGKI-AGLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTK---LDDVSKAHLFQEVRCMKL 73
            ||:: .|.|.|.:|||.|.|..||:..|..||.|||||::::.|   ||.|.|  :.:|::.:||
  Rat     8 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKL 70

  Fly    74 VQHPNVVRLYEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEEL-ARKYFRQILRAITYCHQL 137
            .:||::::||:||.|.|..::|:|...||:|:|||.||  |..||: ||:.|:|||.|:.|||:.
  Rat    71 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEVEARRLFQQILSAVDYCHRH 133

  Fly   138 HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDI 202
            .|||||||||||:...::. .|:.|||.||....|:.|.|.|||..|:|||::.|..|..|.|||
  Rat   134 MVVHRDLKPENVLLDAQMN-AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI 197

  Fly   203 WSLGVILYMLVCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEI 267
            ||.|||||.|:||..||:..:.......|....:.:|.:::.....|:..||..||.||||:::|
  Rat   198 WSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSIATLLMHMLQVDPLKRATIKDI 262

  Fly   268 ASSAWLKPIDEPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMINGNIASKEEILQALDKNKYNH 332
            ....|.|. |.|       .:..|         ||.::      :.|:...|.:.:..:|     
  Rat   263 REHEWFKQ-DLP-------SYLFP---------EDPSY------DANVIDDEAVKEVCEK----- 299

  Fly   333 ITATYFLLAELRLRRR------REELAQKQRLLNDASMKVGDASRKLVPEKPSPTEAQKGGVPIS 391
                 |...|..:...      :::||....|:.|....:..||...:...|             
  Rat   300 -----FECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSP------------- 346

  Fly   392 INVTPAAQFANDGGKPDKRSRKCSIVREEDEEESATECTAVGNELKVTSSSRREAFSDSPFSRSI 456
                |...|.:|                     ||..   :...||..........:|||     
  Rat   347 ----PTGSFMDD---------------------SAMH---IPPGLKPHPERMPPLIADSP----- 378

  Fly   457 HERSSSEPGNQTKGEQIA------NSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSGL 515
            ..|...:..|.||.:.:|      :.|:.|.|:.   ..:.|.:...:||::...|:     ...
  Rat   379 KARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKP---YDIMAEVYRAMKQLDFEWKV-----VNA 435

  Fly   516 KELEIGKLKPLPSSSKNPV------------LTHRRTKLNKIRTPSCSSSEASDDDTKTRNKKKI 568
            ..|.:.:        ||||            |...|:.|...:         |.||.....:.. 
  Rat   436 YHLRVRR--------KNPVTGNYVKMSLQLYLVDNRSYLLDFK---------SIDDEVVEQRSG- 482

  Fly   569 NKFVGDTPVR----FRMHRRDSHDDSSDSQDQLYPPPGSASNAGNFISKSGSVSGKKEGQS 625
                ..||.|    ..:||..|..|||.:::.               |.|||::|...|.:
  Rat   483 ----SSTPQRSCSAAGLHRPRSSVDSSTAENH---------------SLSGSLTGSLTGST 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 114/261 (44%)
UBA_SNRK 296..338 CDD:270524 5/41 (12%)
Prkaa2NP_076481.2 STKc_AMPK_alpha 13..268 CDD:270981 114/259 (44%)
UBA_AID_AAPK2 285..349 CDD:270587 13/90 (14%)
AIS. /evidence=ECO:0000250|UniProtKB:Q13131 291..376 18/135 (13%)
AMPKA2_C 395..550 CDD:213385 34/175 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 478..520 14/61 (23%)

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