DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Sik3

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_001258145.2 Gene:Sik3 / 684112 RGDID:1593938 Length:1369 Species:Rattus norvegicus


Alignment Length:761 Identity:210/761 - (27%)
Similarity:361/761 - (47%) Gaps:134/761 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QPVGGVSDGKIA---GLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQE 67
            :|....|.|.:|   |.|:::.|:|.|:|||||.|.|:.|.||||:|::|||:||:.:...:|:|
  Rat    49 RPTAPASRGSMAARIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQLDEENLKKIFRE 113

  Fly    68 VRCMKLVQHPNVVRLYEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAIT 132
            |:.||::.||:::|||:|::|:..:|||.|...||:::|:::.| ..::|:.||:.|:||:.|:.
  Rat   114 VQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAH-GRMAEKEARRKFKQIVTAVY 177

  Fly   133 YCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDA 197
            :||..::||||||.||::....|. :|:.||||||.|.|||.|:|:|||..|:|||:..|..||.
  Rat   178 FCHCRNIVHRDLKAENLLLDANLN-IKIADFGFSNLFTPGQLLKTWCGSPPYAAPELFEGKEYDG 241

  Fly   198 PAVDIWSLGVILYMLVCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRA 262
            |.||||||||:||:||||..||:.:........::..|:.:|..:||:|..||..|||.||.||.
  Rat   242 PKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRL 306

  Fly   263 TVEEIASSAWLKPIDEPDSTTSTSEHFLPLVSR-EQLGEEDHAFIIQKMINGNI--------ASK 318
            ::|:|....|:|..|       ...:|..|::. :||.||..|    :.:|..:        ..|
  Rat   307 SMEQICRHRWMKLGD-------ADPNFERLIAECQQLKEERQA----EPLNDEVLLAMEDMGLDK 360

  Fly   319 EEILQALDKNKYNHITATYFLLAELRLRRRREELAQKQRLLNDASMKVGDASRKLVPEKPSPTEA 383
            |..||:|..:.|:|.:|.|.||.:..         :|.:.|...::.  ...:.:..:.|...:|
  Rat   361 ERTLQSLRSDAYDHYSAIYSLLCDRH---------KKNKTLRPGALP--STPQAMTFQAPVNIQA 414

  Fly   384 QKGGVPISINVTPAAQFANDGG---KPDKRSRKCSIVREEDE-EESATECTAVGNELKVTSSSRR 444
            ::.|..::|:| |..|..|...   :||.     ::..:.|| ||.:.|..     ::..|..|.
  Rat   415 EQTGTAMNISV-PQVQLINPENQIIEPDG-----AVNLDSDEGEEPSPEAL-----VRYLSMRRH 468

  Fly   445 EAFSDSPFSRSIHERSSSEPGNQTKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQME------- 502
            ......|.:..:.|.....||...     ||...|.     :.|:.:....|.|..|:       
  Rat   469 TVGVADPRTEVMDEMQKLLPGFPG-----ANPQTPF-----LQVAPNMNFMHNLLPMQSLQPTGQ 523

  Fly   503 ----KSAKIDEDTLSGLKELEIGKLKPLPSSSKNPVLTHRRTKLNKIRTPS-------------C 550
                :.:.:...||..|..:  |.|....|.....:..|.:..|.:.|.||             .
  Rat   524 LEYKEQSLLQPPTLQLLNGM--GPLGRRASDGGANIQLHAQQLLKRPRGPSPLVTMTPAVPAVTP 586

  Fly   551 SSSEASDDDTKTRNKKKINKFVGDTPVRFRMHRRD-SHDDSSDSQDQLYPPPGSASNAGNFISKS 614
            ...|:||.:.   :::.:.:::.:...|..:.... :.:...|.|.||                 
  Rat   587 VDEESSDGEP---DQEAVQRYLANRSKRHTLAMTSPTAEIPPDLQRQL----------------- 631

  Fly   615 GSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKHSHAE-RQLADSSTA-------- 670
                |::..:|:...|:...|::|.::     |..|..|:.....:. |:.:|.:.:        
  Rat   632 ----GQQSFRSRVWPPHLVPDQHRSTY-----KDSNTLHLPTERFSPVRRFSDGAASIQAFKAHL 687

  Fly   671 -TTGNSTNRRRRIRESQSLDRITEAQ-------EYEMRHRCYAESE 708
             ..|||::.::..:|.:.|.::...|       :.:.:|..|.:.:
  Rat   688 ERMGNSSSIKQLQQECEQLQKMYGGQVDERTLEKTQQQHMLYQQEQ 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 118/259 (46%)
UBA_SNRK 296..338 CDD:270524 14/49 (29%)
Sik3NP_001258145.2 STKc_SIK 65..317 CDD:270973 116/253 (46%)
UBA_like_SF 346..390 CDD:473871 13/52 (25%)

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