DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Mark4

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_001178000.1 Gene:Mark4 / 680407 RGDID:1591792 Length:752 Species:Rattus norvegicus


Alignment Length:634 Identity:207/634 - (32%)
Similarity:298/634 - (47%) Gaps:138/634 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRL 82
            |.|.|..|:|.|:||.||||||:.||.:||:|::|||:|:..|...||:|||.||.:.|||:|:|
  Rat    57 GNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFREVRIMKGLNHPNIVKL 121

  Fly    83 YEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPE 147
            :|||:|:..||||:|....|:::||::.| ..:.|:.||..||||:.|:.||||.::||||||.|
  Rat   122 FEVIETEKTLYLVMEYASAGEVFDYLVSH-GRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAE 185

  Fly   148 NVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML 212
            |::...:.. :|:.||||||:|..|.||:|||||..|:|||:..|..||.|.|||||||||||.|
  Rat   186 NLLLDAEAN-IKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTL 249

  Fly   213 VCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIASSAW----- 272
            |.|..||:..|..|....::..||.||.::||||..::...||.:|.||.|:|:|....|     
  Rat   250 VSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQIMKDKWINIGY 314

  Fly   273 ----LKPIDEPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMINGNIASKEEILQALDKNKYNHI 333
                |||..||:               |..|:...   |:.|: |...::|||.:||...|||.:
  Rat   315 EGEELKPYTEPE---------------EDFGDTKR---IEVMV-GMGYTREEIKEALTNQKYNEV 360

  Fly   334 TATYFLLAELRLRRRREELAQKQRLLNDASMKVGDASRKLVPEKPSPTEAQKGGVPISINVTPAA 398
            ||||.||.     |:.||                                  ||           
  Rat   361 TATYLLLG-----RKTEE----------------------------------GG----------- 375

  Fly   399 QFANDGGKPDKRSRKCSIVREEDEEESATECT--AVGNELKVTSSS---RREAFSD--SPFSRSI 456
                |.|.|.....:   ||...:..:.|..:  :..|:.:.||||   |:...||  .|....:
  Rat   376 ----DRGAPGLALAR---VRAPSDTTNGTSSSKGSSHNKGQRTSSSTYHRQRRHSDFCGPSPAPL 433

  Fly   457 H-ERSSSEPGN------QTKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSG 514
            | :||.:..|:      :..|.:.:.|...|.||.....|...:.||...:.|...:..:.|.: 
  Rat   434 HPKRSPTSTGDTELKEERLPGRKASCSAAGSGSRGLPPSSPMVSSAHNPNKAEIPERRKDSTST- 497

  Fly   515 LKELEIGKLKPLPSSSKNPVLTHRRTKLNKIRTPSCSSSEASDDDTKTRNKKKINKFVGDTPVRF 579
                        |::....::|.|.|.:       |:....|:..:...|.|:.:......|   
  Rat   498 ------------PNNLPPSMMTRRNTYV-------CTERPGSERQSLLPNGKENSSGTSRVP--- 540

  Fly   580 RMHRRDSHDDSSDSQDQLYPPPGSASN--AGNFISKS---GSVSGKKEG 623
                     .:|.|...|.||.|..|.  .|:.|..:   |.|..::.|
  Rat   541 ---------PASPSSHSLAPPSGERSRLARGSTIRSTFHGGQVRDRRAG 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 128/263 (49%)
UBA_SNRK 296..338 CDD:270524 16/41 (39%)
Mark4NP_001178000.1 STKc_MARK 58..310 CDD:270974 126/253 (50%)
UBA_MARK3_4 328..370 CDD:270590 18/50 (36%)
MARK4_C 654..752 CDD:213382
Blue background indicates that the domain is not in the aligned region.

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