DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Tssk

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_650732.1 Gene:Tssk / 42233 FlyBaseID:FBgn0038630 Length:302 Species:Drosophila melanogaster


Alignment Length:273 Identity:82/273 - (30%)
Similarity:150/273 - (54%) Gaps:18/273 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YDLEETLGSGHFAVVKLARHVFT---GAKVAVKVVDKTK--LDDVSKAHLF-QEVRCMKLVQHPN 78
            |::...:|.|.:|.|..|.:...   |..:|.|::||.|  .|.|:|  .| :|:..:..:.|.|
  Fly    28 YNVGHKIGEGSYATVITAGYADDHGHGVHLACKIIDKAKAPTDFVNK--FFPRELEILTKIDHSN 90

  Fly    79 VVRLYEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRD 143
            :::::.::....|:::.:...:.|||..:| |....:.|:.::.:|.|:.:|:.|.|.|.:.|||
  Fly    91 IIQIHSILQRGPKIFIFMRYAENGDLLSHI-KRSGPIDEKQSKIWFFQMSKALKYLHNLDIAHRD 154

  Fly   144 LKPENVVFFEKLGLVKLTDFGFSNKFLPG----QKLETFCGSLAYSAPEILLGDSYDAPAVDIWS 204
            ||.||::..::|. :||.||||:......    .|.||:|||.||:|||::.|..||....|.||
  Fly   155 LKCENILLSKRLN-IKLADFGFARYCRDDNGREMKSETYCGSAAYAAPEVVCGRPYDPKLADAWS 218

  Fly   205 LGVILYMLVCGQAPFEKANDSETLTMIMDCKYT----VPSHVSTDCRDLIASMLVRDPKKRATVE 265
            |||||::::..:.||:.:|.::.|....:.|:.    :...:|...:..::.:|..:...|..:.
  Fly   219 LGVILFIMMNAKMPFDDSNLTKLLEDQRNRKFAFRRKLQETISAQAKATVSVLLEPEAHARWNLR 283

  Fly   266 EIASSAWLKPIDE 278
            ||.:.|||:.::|
  Fly   284 EILNCAWLRTVEE 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 79/266 (30%)
UBA_SNRK 296..338 CDD:270524
TsskNP_650732.1 STKc_TSSK-like 27..291 CDD:270982 79/266 (30%)
Blue background indicates that the domain is not in the aligned region.

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