DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and Smok2a

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_038769.1 Gene:Smok2a / 27263 MGIID:1351487 Length:504 Species:Mus musculus


Alignment Length:44 Identity:15/44 - (34%)
Similarity:19/44 - (43%) Gaps:12/44 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 FQSLAASFAAGN------DNF----QSLDDEDILSRHSQAGRRR 263
            |...|.||..||      .:|    :|..|.|::  |..||.||
Mouse   162 FYHFAHSFVRGNWRNEAESSFALLAKSCHDLDLI--HHWAGGRR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 15/44 (34%)
UBA_SNRK 296..338 CDD:270524
Smok2aNP_038769.1 STKc_AMPK-like 27..275 CDD:270905 15/44 (34%)
UBA_MARK_Par1 295..334 CDD:270522
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..403
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..469
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.