DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and Tssk2

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_033462.2 Gene:Tssk2 / 22115 MGIID:1347559 Length:358 Species:Mus musculus


Alignment Length:282 Identity:111/282 - (39%)
Similarity:171/282 - (60%) Gaps:17/282 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GKIAGLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKL-DDVSKAHLFQEVRCMKLVQHP 77
            |.|.|:     .||.|.:|.||.|........||||::|:.|. .|..:..|.:|:..:..|.|.
Mouse    11 GYIVGI-----NLGKGSYAKVKSAYSERLKFNVAVKIIDRKKTPTDFVERFLPREMDILATVNHR 70

  Fly    78 NVVRLYEVIDTQT-KLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVH 141
            ::::.||:.:|.. ::|:|:|||..|||.::| |....|.|::|||.|||:..|:.|||.|.|||
Mouse    71 SIIKTYEIFETSDGRIYIVMELGVQGDLLEFI-KCRGALHEDVARKMFRQLSSAVKYCHDLDVVH 134

  Fly   142 RDLKPENVVFFEKLGLVKLTDFGFSNKFL---PGQKL--ETFCGSLAYSAPEILLGDSYDAPAVD 201
            ||||.||:: .:|...:||:|||||.:.|   .|:.:  :|||||.||:|||:|.|..|.....|
Mouse   135 RDLKCENLL-LDKDFNIKLSDFGFSKRCLRDGSGRIVLSKTFCGSAAYAAPEVLQGIPYQPKVYD 198

  Fly   202 IWSLGVILYMLVCGQAPFEKANDSETLTMIMDCKYTVP--SHVSTDCRDLIASMLVRDPKKRATV 264
            |||||||||::|||..|::.::..:.|.:..:.:...|  .:::.:|:|||..:|..|..:|..:
Mouse   199 IWSLGVILYIMVCGSMPYDDSDIKKMLRIQKEHRVDFPRSKNLTGECKDLIYRILQPDVNRRLHI 263

  Fly   265 EEIASSAWLKPIDEPDSTTSTS 286
            :||.|.:||:| .:|.:.:|.|
Mouse   264 DEILSHSWLQP-PKPKAMSSAS 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 104/265 (39%)
UBA_SNRK 296..338 CDD:270524
Tssk2NP_033462.2 STKc_TSSK1_2-like 10..272 CDD:271067 105/267 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..358
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.