DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Y43D4A.6

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_502989.1 Gene:Y43D4A.6 / 189855 WormBaseID:WBGene00012792 Length:328 Species:Caenorhabditis elegans


Alignment Length:292 Identity:84/292 - (28%)
Similarity:150/292 - (51%) Gaps:28/292 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ETLGSGHFAVVKLARHVFT-GAKVAVKVVD-----KTKLDDVSKAHLFQEVRCMKLVQHPNVVRL 82
            :::|.|.|..|.||..:.. ..|||:|.::     |..|:.:.     ||....|.::|.|:|::
 Worm    10 KSIGKGAFGQVFLAEKLNNPRIKVAMKKINIFGAPKEFLEQIQ-----QEYYIQKNMKHKNIVKM 69

  Fly    83 YEV-IDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKP 146
            |.: :||:. .||..|...||||::.| ..::|:.....:.|.:|::..:.|.|...:||||:||
 Worm    70 YGMSMDTEF-CYLFQEFVTGGDLFEKI-DFENGMPVNQVKGYLKQLMSGLKYIHGCGIVHRDIKP 132

  Fly   147 ENVVFFEKLGLVKLTDFGFSNKFLPGQK---LETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVI 208
            :|:: ......:|:.|||.|.:|:...|   |....|:..:.|||:.....:..|.|||||.|::
 Worm   133 DNLL-INSSDALKIADFGLSTRFIVDDKEILLHERIGTTPFMAPELFAKKKHRGPPVDIWSAGIL 196

  Fly   209 LYMLVCGQAPFEKANDSETL-TMIMD---CKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIAS 269
            ::.|:.|..|:::..:|:.| :..|:   .|..:...:||.....:..:|..:..:|||:|||.|
 Worm   197 VFSLLTGNLPWDEPKESDILYSQWMNNKTSKNCIWYGLSTPVVRFLKKLLKENVNERATIEEIES 261

  Fly   270 SAWLKPIDEPDS------TTSTSEHFLPLVSR 295
            ..||:.::|...      |::..:...|.:||
 Worm   262 DPWLEDLEEERENCTKFPTSTRRKRSFPKISR 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 77/262 (29%)
UBA_SNRK 296..338 CDD:270524 84/292 (29%)
Y43D4A.6NP_502989.1 STKc_Chk1 4..265 CDD:270971 77/262 (29%)

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