DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and kin-29

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_508493.1 Gene:kin-29 / 180574 WormBaseID:WBGene00002210 Length:822 Species:Caenorhabditis elegans


Alignment Length:824 Identity:209/824 - (25%)
Similarity:338/824 - (41%) Gaps:167/824 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRL 82
            ||||:...:|.|:||.|::|||.....|||:|.:|.:.||..:...|.:||:.:|::.||::|:.
 Worm    14 GLYDVGRAIGKGNFATVRIARHKIAKTKVAIKSIDVSALDRENLIKLEREVKIVKVIDHPHIVKS 78

  Fly    83 YEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPE 147
            ||::.....||:|.|....|:||:.::: ...::|.:|||:|.:...|:.|.|...:||||||.|
 Worm    79 YEIMRVDNMLYIVSEYCSSGELYETLIE-KGRVAENVARKWFSETASAVAYLHSQGIVHRDLKAE 142

  Fly   148 NVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML 212
            |:: ..|...:|:.||||||.....|.|.|:|||..|:|||:|||:|||....||||:||:||:|
 Worm   143 NIL-LGKNSNIKIIDFGFSNFQTGDQLLNTWCGSPPYAAPELLLGNSYDGMKADIWSMGVLLYIL 206

  Fly   213 VCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIASSAWLKPID 277
            |.|..||...:.::....::.....:|..||.:|.|.|..|||.:|.||.|::.:....|:...|
 Worm   207 VAGGFPFPSDSVNKLKRSVLSGLVKIPYWVSVECADFIRKMLVLNPGKRYTIQNVLQHRWMHIRD 271

  Fly   278 EPDSTTSTS-EHFLPLVSRE--QLGEEDHAFIIQKMINGNIASKEEILQA-LDKNKYNHITATYF 338
            :.....:.. ...:|..|.|  |...:.:..|:..|......|:|:|:.| |.::..:.|.|||.
 Worm   272 DVQKNQAAQLLEAIPSSSIEIRQQSTKLNPTIMMFMQQHGKWSEEQIIDAVLGRDFESPIFATYE 336

  Fly   339 LLAEL----RLRRRREELAQKQRLLNDASMKVGDASRKLVPEKP-SPTEAQKGGVPISINVTPAA 398
            |||:.    .|....||..::.   :..|:..|.|:   |.|:| :||          |:....|
 Worm   337 LLADKVKKGTLEGTGEEFPRRG---SRGSILSGKAN---VDEQPLTPT----------ISAHQLA 385

  Fly   399 QFANDGGKPDKRSRKCSIVREEDEEESATECTAVGNELKVTSSSRREAFSDSPFSR---SIHERS 460
            |.                      ..|:.:|.:       ..||..:...|||.|.   ..|||.
 Worm   386 QL----------------------NLSSPDCDS-------DDSSNSDLCDDSPMSSMGPMNHERQ 421

  Fly   461 SSEP-GNQTKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLS-----GLKELE 519
            ...| |....|.:..|       |...:.:.:..|:..:........:..:..|     |...:.
 Worm   422 FGTPHGLDIIGNRFEN-------RRHTLCASEQLLSPNMMGQFPPPNLLLNNFSMNPPLGFPPMP 479

  Fly   520 IGKLKPLPSSSKNPVL-THRRTKLNKIRTPSCSSSEASDDDTKTRNKKKINKFVGDTPVRFRMHR 583
            .|:....|..|.:|.. |.....|:|:.....|...||..:|.......:.:.:.:.|.      
 Worm   480 EGQAAEFPLPSLHPAFATIPIADLSKMLPVPKSERRASAGETLLPTNFDLTQHLANLPA------ 538

  Fly   584 RDSHDDSSDSQDQLYPP---PGSASNAGNFISKSGSVSGKKE----------GQSQ------YKE 629
                           ||   |.......:::||.|   ||:.          |..|      .:.
 Worm   539 ---------------PPISFPTVEEEGKSYLSKYG---GKRNTVHCLGNQLGGGIQNPIPRYQRT 585

  Fly   630 PNNKSD--ENRKSHSQKNRKQHNKDHVDKHSHAERQLADSSTATTGNSTNRRRRIR--------- 683
            |..|:.  |.|.|.:..:.....::|::|       |...:..|..:.|...:..:         
 Worm   586 PYTKAPPAERRSSWASPSLSAQQQNHLEK-------LFKQALQTNNDMTRLHKEFKGLSHGCAQS 643

  Fly   684 ----ESQSL--DRITEAQEYEMRHRCYAESEAASSSSSSTQHIDQR-----------YSLLSLNT 731
                |..||  .:|:...||..:|..     |.|:||.....|.|:           .:.:..::
 Worm   644 QITNEGSSLACPQISITDEYNRQHNI-----APSASSFDPVSIFQKNAQEVVFGQRPATAIGFSS 703

  Fly   732 STFSVAETKEEYDEEAD-----------ATNATDQIMNTLNAAK 764
            ::||...|.|:.....|           .|...|::..:||..|
 Worm   704 TSFSGMSTPEQTTRSIDDRVRSIVCTLPFTEVIDELKASLNILK 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 101/254 (40%)
UBA_SNRK 296..338 CDD:270524 12/44 (27%)
kin-29NP_508493.1 Protein Kinases, catalytic domain 16..267 CDD:473864 99/252 (39%)

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