DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and R02C2.1

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_503161.2 Gene:R02C2.1 / 178550 WormBaseID:WBGene00019814 Length:312 Species:Caenorhabditis elegans


Alignment Length:276 Identity:88/276 - (31%)
Similarity:144/276 - (52%) Gaps:26/276 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YDLEETLGSGHFAVV---KLARHVFTGAKVAVKVV-----DKTKLDDVSKAHLFQEVRCMKLVQH 76
            |.:.|.|..|.|..|   :|.|:  ...|||||.|     .:..|..|.|.:...  |.:..:.|
 Worm    18 YKVVEHLCKGSFGQVHLCELTRN--PSVKVAVKEVAVSGKSRKNLTAVQKEYKIH--RRLSKIGH 78

  Fly    77 PNVVRLYEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVH 141
            .||:::.::|:|.....||:|..|||||:|. :|.....|.:.|..||:|:::.:.:.|:..:||
 Worm    79 ENVIQMMKMIETPKFYSLVMEYADGGDLFDE-LKEQEKFSRKDAHSYFKQLIKGLKFIHEQGIVH 142

  Fly   142 RDLKPENVVFF-----EKLGLVKLTDFGFSNKF-LPGQK--LETFCGSLAYSAPEILLGDSYDAP 198
            ||:|.||::..     :..|.:|:||||.:.|: ..|::  |...|||..|:|||:..|:.|..|
 Worm   143 RDIKLENLLLVYSESEDDPGTLKITDFGLATKYRKDGEEIMLSEDCGSKPYAAPEVCTGNDYRGP 207

  Fly   199 AVDIWSLGVILYMLVCGQAPFEKANDSETLTM-----IMDCKYTVPSHVSTDCRDLIASMLVRDP 258
            .|||||.||:|..::.|:..::.||..:....     ..|.|..:.:.:|.....|:..:|..:|
 Worm   208 PVDIWSAGVVLMTMLVGEHSWKVANKEKDAAYSNWINAKDEKANLWNVISGPTTALLRKLLHANP 272

  Fly   259 KKRATVEEIASSAWLK 274
            :||||:.:|.:..|.:
 Worm   273 EKRATMAKIEADPWFR 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 87/273 (32%)
UBA_SNRK 296..338 CDD:270524
R02C2.1NP_503161.2 Protein Kinases, catalytic domain 16..287 CDD:473864 87/273 (32%)
Blue background indicates that the domain is not in the aligned region.

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