DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Mark1

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:XP_038946210.1 Gene:Mark1 / 117016 RGDID:619882 Length:794 Species:Rattus norvegicus


Alignment Length:753 Identity:236/753 - (31%)
Similarity:359/753 - (47%) Gaps:142/753 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRL 82
            |.|.|::|:|.|:||.|||||||.||.:||||::|||:|:..|...||:|||.||::.|||:|:|
  Rat    58 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 122

  Fly    83 YEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPE 147
            :|||:|:..||||:|...||:::||::.| ..:.|:.||..||||:.|:.||||..:||||||.|
  Rat   123 FEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAE 186

  Fly   148 NVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML 212
            |::....:. :|:.||||||:|..|.||:|||||..|:|||:..|..||.|.||:||||||||.|
  Rat   187 NLLLDADMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 250

  Fly   213 VCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIASSAW----- 272
            |.|..||:..|..|....::..||.||.::||||.:|:..:||.:|.||.::|:|....|     
  Rat   251 VSGSLPFDGQNLKELRERVLRGKYRVPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGH 315

  Fly   273 ----LKPIDEPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMINGNIASKEEILQALDKNKYNHI 333
                |||..||:...:.::.                  |..|:....| ::||..||...||:.:
  Rat   316 EEEELKPYSEPELDLNDAKR------------------IDIMVTMGFA-RDEINDALVSQKYDEV 361

  Fly   334 TATYFLLAELRLRRRRE----------ELAQKQRL---LNDASMKVGDASRKLVPEKPSPTEAQK 385
            .|||.||.    |:..|          .|.|:.|.   ||::::           :.|:..:.|:
  Rat   362 MATYILLG----RKPPEFEGGESLSSGNLCQRSRPSSDLNNSTL-----------QSPAHLKVQR 411

  Fly   386 GGVPISIN-------------VTPAAQFANDGGKPDKRSRKCSIVREEDEE---ESATE--CTAV 432
            .   ||.|             :.||..:.       ||.:..|:..|:.||   ::|..  .|.|
  Rat   412 S---ISANQKQRRFSDHAGPSIPPAVSYT-------KRPQANSVESEQKEEWDKDTARRLGSTTV 466

  Fly   433 GNELKVTSS-----SRREA--------FSDSPFSRS---IHERSSS-----EPGNQTKGEQIANS 476
            |::.:||:|     .|:::        :|....:|.   :.|||:.     :.|..:...:::.|
  Rat   467 GSKSEVTASPLVGPDRKKSSAGPSNNVYSGGSMTRRNTYVCERSTDRYAALQNGRDSSLTEMSAS 531

  Fly   477 GVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSGLKELEIGKLKPLPSSSKNPVLTHRRTK 541
            .:.|...|.......|...|: |.|..|....:.||..:|:         .|.:..|..|.:|. 
  Rat   532 SMSSTGSTVASAGPSARPRHQ-KSMSTSGHPIKVTLPTIKD---------GSEAYRPGSTAQRV- 585

  Fly   542 LNKIRTPSCSSSEASDDDTK--TRNKKKINKFVGDTPVRFRMHRRDSHDDSSDSQDQLYPPPGSA 604
              ...:||..|..||..|..  .|.....:.|.|: .:|.|.....|...:|.|.|.........
  Rat   586 --PAASPSAHSISASTPDRTRFPRGSSSRSTFHGE-QLRERRSAAYSGPPASPSHDTAALAHARR 647

  Fly   605 SNAGNFISKSGSVSGKK---EGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKHSHAERQLAD 666
            ..:...|||..|...::   ||     |.:.::|..|.|..:...|:..|:      ...|.|..
  Rat   648 GTSTGIISKITSKFVRRDPSEG-----EASGRTDTARGSSGEPKDKEEGKE------AKPRSLRF 701

  Fly   667 SSTATTGNSTNRRRRIRESQSLDRITEAQ--EYEMRHR 702
            :.:..|.:|.:....:||   :.::.:|.  :||.|.|
  Rat   702 TWSMKTTSSMDPNDMVRE---IRKVLDANTCDYEQRER 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 130/263 (49%)
UBA_SNRK 296..338 CDD:270524 11/41 (27%)
Mark1XP_038946210.1 STKc_MARK 59..311 CDD:270974 128/253 (51%)
UBA_MARK1 331..371 CDD:270588 14/62 (23%)
MARK1-3_C 695..792 CDD:213381 11/45 (24%)

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