DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and Gm4513

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_001311480.1 Gene:Gm4513 / 101055864 MGIID:3782698 Length:301 Species:Mus musculus


Alignment Length:278 Identity:109/278 - (39%)
Similarity:162/278 - (58%) Gaps:16/278 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRLYE 84
            |.:..|||.|.|:|||.|.||.|...||||::..||   ...:.:.:|.|.||.:.|||:::|:.
Mouse    27 YKMLNTLGEGKFSVVKRAFHVPTSTSVAVKILQNTK---EYTSPICREARIMKSLSHPNIIKLFH 88

  Fly    85 VIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPENV 149
            |:..:...|||:|....|:|.|.|:|..| |.|...|:.|.||:.|:.|||..|:||||:|..|:
Mouse    89 VVQRREITYLVMEYASEGELQDRIIKVGS-LEESETRRLFAQIVHAVQYCHDHHIVHRDIKASNI 152

  Fly   150 VFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC 214
            : .:..|..||.|||.:.:.:|||||..|||:|.|.|||:|....|:.|.||||||||:|::::.
Mouse   153 L-IDCRGNAKLCDFGLAAEVIPGQKLAGFCGTLPYCAPELLQAVKYEGPPVDIWSLGVLLFLMLS 216

  Fly   215 GQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEI-------ASSAW 272
            |..||:..:..:....|:...:::|||||.|..::|..:|:.:|.:|.|:.:|       .|.|.
Mouse   217 GNLPFQGRSFVDLKQEIISANFSIPSHVSIDISNVIIELLMINPSRRPTIHQIMRHPMIRGSEAC 281

  Fly   273 LKP----IDEPDSTTSTS 286
            |.|    |.:....|:.|
Mouse   282 LPPTSTQISQAPQATALS 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 104/259 (40%)
UBA_SNRK 296..338 CDD:270524
Gm4513NP_001311480.1 STKc_AMPK-like 26..273 CDD:270905 102/250 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.