DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and pim3

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:XP_002932230.2 Gene:pim3 / 100497723 XenbaseID:XB-GENE-922022 Length:323 Species:Xenopus tropicalis


Alignment Length:306 Identity:99/306 - (32%)
Similarity:146/306 - (47%) Gaps:30/306 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QPVGGVSDGKIAGLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDD---VSKAHLFQE 67
            ||| .|.......:|.:...||||.|..|.....:..|..||||.|.|.::.|   ::...:..|
 Frog    27 QPV-KVEKEPFEKVYQVGSVLGSGGFGTVYSGSRIADGLPVAVKHVAKERVTDWGTLNGVMVPLE 90

  Fly    68 VRCMKLV--QHPNVVRLYEVIDTQTKLYLVLELGDG-GDLYDYIMKHDSGLSEELARKYFRQILR 129
            :..:|.|  ....|::|.:..:......:|:|..:. .||:|||.: ...|.|:.||.:|||:|.
 Frog    91 IVLLKKVGTGFRGVIKLLDWYERADGFLIVMERPEPVKDLFDYITE-KGALDEDTARGFFRQVLE 154

  Fly   130 AITYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDS 194
            |:.:|:...|||||:|.||::...:.|.:||.||| |...|.......|.|:..||.||.:....
 Frog   155 AVRHCYSCGVVHRDIKDENLLVDLRNGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWVRYHR 218

  Fly   195 YDAPAVDIWSLGVILYMLVCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPK 259
            |...:..:|||||:||.:|||..|||:  |.|    |:..:......:|.:|:.||...|...|.
 Frog   219 YHGRSATVWSLGVLLYDMVCGDIPFEQ--DEE----IVRVRLYFRRRISAECQQLIKWCLSLRPS 277

  Fly   260 KRATVEEIASSAW---------------LKPIDEPDSTTSTSEHFL 290
            .|.|:|:|....|               |:.||...|:||:|...|
 Frog   278 DRPTLEQIFDHPWMCKCDLVKSEDCDLRLRTIDNDASSTSSSNESL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 87/277 (31%)
UBA_SNRK 296..338 CDD:270524
pim3XP_002932230.2 STKc_PIM3 39..291 CDD:271004 86/259 (33%)
Blue background indicates that the domain is not in the aligned region.

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