DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snrk and sik3

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:XP_004916140.2 Gene:sik3 / 100492939 XenbaseID:XB-GENE-6042192 Length:1284 Species:Xenopus tropicalis


Alignment Length:947 Identity:252/947 - (26%)
Similarity:413/947 - (43%) Gaps:177/947 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRL 82
            |.|:::.|:|.|:|||||||.|:.|.||||:|::||||||:.:...:|:||:.||::.||:::||
 Frog    24 GYYEIDRTIGKGNFAVVKLATHIVTRAKVAIKIIDKTKLDEENLKKIFREVQIMKMLCHPHIIRL 88

  Fly    83 YEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPE 147
            |:|::|:..:|||.|...||:::|:::.| ..::|:.|||.|:||:.|:.:||..::||||||.|
 Frog    89 YQVMETERMIYLVTEYASGGEIFDHLVAH-GRMAEKEARKKFKQIVAAVHFCHCRNIVHRDLKAE 152

  Fly   148 NVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML 212
            |::....|. :|:.||||||:|.|||.|:|:|||..|:|||:..|..||.|.||||||||:||:|
 Frog   153 NLLLDANLN-IKIADFGFSNRFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVL 216

  Fly   213 VCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIASSAWLKPID 277
            |||..||:.:........::..|:.:|..:||:|..||..|||.:|.||.::|:|....|:...:
 Frog   217 VCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLEPSKRLSMEQICKHKWMCQGE 281

  Fly   278 ---EPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMINGNIASKEEILQALDKNKYNHITATYFL 339
               |.:...:..:|......|:.|.|:    ::..|:...: .:|..||:|..:.|:|.:|.|.|
 Frog   282 QDLEFERLIAECQHVKLERQRDPLNEQ----VLLTMVEMGL-DRERTLQSLRTDAYDHYSAIYSL 341

  Fly   340 LAELRLRRRREELAQKQRLLNDASMKVGDASRKLVPEKPSPTEAQKGGVPISINVTPAAQFANDG 404
            |.: ||:|.:     ..||....|     |.|.:....|| .:|......:|||| |..|..|..
 Frog   342 LCD-RLKRHK-----TLRLPTQPS-----APRTVSYSTPS-VQADAASNTVSINV-PQVQLINPE 393

  Fly   405 GKPDKRSRKCSIVREEDEEESATECTAVGNELKVTSSSRREAFS--DSPFSRSIHERSSSEPGNQ 467
            .:..:.:...::..:|.||.|.   .|:...|    |.||....  |:.......|.....||..
 Frog   394 NQIVETNGTMTLDSDEAEEPSP---EALARYL----SMRRHTVGVPDTHNESGTDELQKIFPGFP 451

  Fly   468 TKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKID--EDTLSGLKELEI----GKLKPL 526
            ...:||          ..:.|:.:..:.|.|..|..||.::  |.:|.....|::    |.|...
 Frog   452 RVTQQI----------PFLPVTQNTNVLHTLLPMPPSAHLEYKEQSLLQPPTLQLLNGMGPLGRR 506

  Fly   527 PSSSKNPVLTHRRTKLNKIRTPSC-----------------SSSEASDDDTKTR---NKKKINKF 571
            .|.....:..|.:..|.:.|.||.                 ||....|.:...|   |:.|.:..
 Frog   507 ASDGGANIQMHAQLLLKRPRGPSPLVTMATTVTAVTPVDEESSDGEPDQEAVQRYLANRTKRHTL 571

  Fly   572 VGDTPV---------------RFR-----------MHRRDSHDDSSDSQDQLYPPPGSASNAGNF 610
            ...:|.               .||           :||....|.::     |:.|....|....|
 Frog   572 AMTSPTAEIPPELQRQLGQQQAFRNRAWPPHLAPDLHRSMYKDSNT-----LHLPAERFSPVRRF 631

  Fly   611 -------------ISKSGSVSGKKEGQSQYKEPNNK-----SDENRKSHSQKNRKQHNKDHVDKH 657
                         :.|.|:.:...:...|..|...|     .||....|:|:....:..:|  :|
 Frog   632 SDGAATIQAFKAHLEKMGNQNSSIKQLQQECEQLQKMYGVHMDERTLEHTQQQHVMYQHEH--QH 694

  Fly   658 SHAERQLAD------------SSTATTGNS------TNRRRRIRESQSLDRITEAQEYEMRHRCY 704
            ...::|:.|            ||:.|..:.      |::.:|:|...|......|..:..|.   
 Frog   695 HLLQQQIQDCIRPAQPSPPLQSSSMTPASENQPALLTHQLQRLRIQPSSPPPNPASNHLFRQ--- 756

  Fly   705 AESEAASSSSSSTQ-H---IDQRYSLLSLNTSTFSVAET--------------KEEYDEEADATN 751
            ..|....|||:..| |   ...:|..:..::|.:..:.|              :::..::.....
 Frog   757 PNSSPPPSSSAMLQTHGATSSSQYPGMPTHSSIYQPSSTGSPPPSMALPRMSIQQQQSQQQSPQQ 821

  Fly   752 ATDQIMNTLNAAKAT-----------LQQEQYFNNNTNLSRNFNHNHNQSIIHISSQKANGKKSN 805
            .|.|:....:...|:           :|.:|   ..:.:|...|::|......:|:..|.....|
 Frog   822 VTIQVQEASDLPGASRGMPIIPCANHIQMQQ---RASLMSSMGNYSHRPLSKQLSADNAEVHSLN 883

  Fly   806 E---TPKDIYNLNSIEHIDLILEDKSLTKAIHV-TGS 838
            .   :|...|:...: |..:..|......|::. |||
 Frog   884 MAHFSPSTNYDQTHL-HPHVFAEQPRPPPAVYTSTGS 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 119/254 (47%)
UBA_SNRK 296..338 CDD:270524 10/41 (24%)
sik3XP_004916140.2 STKc_SIK 25..277 CDD:270973 118/253 (47%)
UBA_SIK3 306..350 CDD:270593 15/49 (31%)

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