DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and Gm10662

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:NP_001188293.1 Gene:Gm10662 / 100043665 MGIID:3642760 Length:313 Species:Mus musculus


Alignment Length:288 Identity:108/288 - (37%)
Similarity:165/288 - (57%) Gaps:16/288 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRLYE 84
            |.:..|||.|:|:|||.|.||.|...||||::..||   ...:.:.:|.|.||.:.|||:::|:.
Mouse    34 YKMLNTLGEGNFSVVKRAFHVPTSTSVAVKILQNTK---EYTSPICREARIMKSLSHPNIIKLFH 95

  Fly    85 VIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPENV 149
            |:..:...|||:|....|:|.|.|:...| |.|...|:.|.||:.|:.|||..|:||||:|..|:
Mouse    96 VVQRRETTYLVMEYASEGELLDRIINVVS-LEESETRRLFAQIVHAVQYCHDHHIVHRDIKASNI 159

  Fly   150 VFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC 214
            : .:..|..||.|||.:.:.:|||||..|||:|.|.|||:|..:.|:...||||||||:|:::|.
Mouse   160 L-IDCRGNAKLCDFGLAAEVIPGQKLAGFCGTLPYCAPELLQAEKYEGLPVDIWSLGVLLFLMVS 223

  Fly   215 GQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVEEIASSAWLKPIDEP 279
            |..||:..:..:....|:...:::|||||.|..::|..:|:.:|.:|.|:.:|.....::     
Mouse   224 GNLPFQGRSFVDLKQEIISANFSIPSHVSIDISNVIIELLMINPSRRPTIHQIMRHPMIR----- 283

  Fly   280 DSTTSTSEHFLPLVSREQL-GEEDHAFI 306
                 .||..||..|.:.. |...|:.:
Mouse   284 -----GSEACLPPTSTQTFPGTPSHSIV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 101/252 (40%)
UBA_SNRK 296..338 CDD:270524 2/12 (17%)
Gm10662NP_001188293.1 STKc_AMPK-like 33..280 CDD:270905 101/250 (40%)

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