DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and mark2b

DIOPT Version :10

Sequence 1:NP_610942.2 Gene:Snrk / 36579 FlyBaseID:FBgn0033915 Length:860 Species:Drosophila melanogaster
Sequence 2:XP_009301419.1 Gene:mark2b / 100005996 ZFINID:ZDB-GENE-080215-4 Length:790 Species:Danio rerio


Alignment Length:739 Identity:232/739 - (31%)
Similarity:328/739 - (44%) Gaps:170/739 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GLYDLEETLGSGHFAVVKLARHVFTGAKVAVKVVDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRL 82
            |.|.|.:|:|.|:||.|||||||.|..:||||::|||:|:..|...:|:|||.|||:.|||:|:|
Zfish    47 GNYRLLKTIGKGNFAKVKLARHVLTSKEVAVKIIDKTQLNSSSLQKVFREVRIMKLLNHPNIVKL 111

  Fly    83 YEVIDTQTKLYLVLELGDGGDLYDYIMKHDSGLSEELARKYFRQILRAITYCHQLHVVHRDLKPE 147
            :|||:|...||||:|...||:::||::.| ..:.|:.||..||||:.|:.||||..:||||||.|
Zfish   112 FEVIETDKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAE 175

  Fly   148 NVVFFEKLGLVKLTDFGFSNKFLPGQKLETFCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML 212
            |::....:. :|:.||||||:|..|.||:|||||..|:|||:..|..||.|.||:||||||||.|
Zfish   176 NLLLDADMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 239

  Fly   213 VCGQAPFEKANDSETLTMIMDCKYTVPSHVSTDCRDLIASMLVRDPKKRATVE-EIASSAW---- 272
            |.|..||:..|..|....::..||.:|.::||||.:|:...|:.:|.||.::| :|....|    
Zfish   240 VSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPTKRGSLEQQIMKDRWMNVG 304

  Fly   273 -----LKPIDEPDSTTSTSEHFLPLVSREQLGEEDHAFIIQKMINGNIASKEEILQALDKNKYNH 332
                 |||..||............::   |:|                .|:|||..:|.|.|||.
Zfish   305 YEDDDLKPYIEPQPDYKDPRRTDIML---QMG----------------FSQEEIEDSLVKQKYNE 350

  Fly   333 ITATYFLLAELRLRRRREELAQKQRLLNDASMKVGDASRKLVPEKPSPT-EAQKGGVPISINVTP 396
            :.|||.|     |..|..||.:...|    |:|....|.......|||. :.|:.   :|....|
Zfish   351 VMATYLL-----LDYRNSELDEGVNL----SLKSRPGSDLTNSNAPSPPHKVQRS---VSSTQKP 403

  Fly   397 AAQFANDGGKPDKRSRKCSIVREEDEEESATECTAVGNELKVTSSSRREAFSDSPFSRSIHERSS 461
            |.: :.|.|...||.:..:....||.....:..:.......|.||.|::  |.:|.:.||....:
Zfish   404 ARR-STDQGSYSKRPQGENKHGVEDSGRKGSSSSTKVPPSPVISSERKK--SSTPSTNSILSTGT 465

  Fly   462 SEPGNQTKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSGLKELEIGKLKPL 526
            |...|....|: |..||.:                           .:|:||            .
Zfish   466 SRSRNSPISER-ATLGVQN---------------------------GKDSLS------------T 490

  Fly   527 PSS-----SKNPVLTHRRTKLNKIRTPSCSSSEASDDDTKTRNKKKINKFVGDTPVRFRMHRRDS 586
            |.|     |..|||               |||.:|   ::||:.|.::.....:|.....||   
Zfish   491 PGSRASTASAGPVL---------------SSSSSS---SRTRHHKSLSTSAHPSPADLHSHR--- 534

  Fly   587 HDDSSDSQDQLYPP---PGSASNAGNFISKSGSVSGKKEGQSQYKEPNNKSDEN-------RKSH 641
               .||      ||   ||::.:|.|..|.:|:        .:...|......|       |.:.
Zfish   535 ---PSD------PPQRAPGASPSAHNISSAAGT--------DRTNFPRGVPTRNTFHLGQQRGAR 582

  Fly   642 SQKNRKQHNKDHVDKHSHAERQLADSSTATTGNSTNRR------------RRIRESQSLDRITEA 694
            .|:....|........||             |||..||            :.:|.:.|. |....
Zfish   583 DQQGSPYHGAPASPSLSH-------------GNSQQRRPAASGIFSKFTSKFVRRNLSF-RFPRR 633

  Fly   695 QEYEMRHRCYAESEAASSSSSSTQ 718
            ..||..    .:.|.:.|..||.:
Zfish   634 SPYEGE----GQEEGSRSMLSSAE 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_610942.2 STKc_SNRK 16..273 CDD:270976 127/264 (48%)
UBA_SNRK 296..338 CDD:270524 13/41 (32%)
mark2bXP_009301419.1 STKc_MARK 48..301 CDD:270974 125/254 (49%)
UBA_MARK2 319..360 CDD:270589 16/64 (25%)
AMPKA_C_like 691..789 CDD:473060
Blue background indicates that the domain is not in the aligned region.

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