DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Opa1 and DL1

DIOPT Version :9

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001331306.1 Gene:DL1 / 834213 AraportID:AT5G42080 Length:610 Species:Arabidopsis thaliana


Alignment Length:666 Identity:150/666 - (22%)
Similarity:266/666 - (39%) Gaps:181/666 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 TMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGEMMTRAPVKVTLA---EGPYHVAQFRDS 355
            |:.|.||.:.|||.|||||:||||||......||||| ::||.|:.:.|.   :|....|:|...
plant    29 TLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSG-IVTRRPLVLQLQKIDDGTREYAEFLHL 92

  Fly   356 DREYDLTKESDLQDLRRDVEFRMKASVRGGKTVSNEVIAMTVKGPGLQRMVLVDLPGIISTMTVD 420
            .|:    |.:|...:|::::..........|.:|:..|.:::..|.:..:.|:|||| ::.:.||
plant    93 PRK----KFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVVNLTLIDLPG-LTKVAVD 152

  Fly   421 MASDT--KDSIHQMTKHYMSNPNAIILCIQDGSVDAERSNVTDLVMQCDPLGRRTIFVLTKVDLA 483
            ..||:  || |..|.:.|:..||.|||.|...:.|...|:...:..:.||.|.||..||||:||.
plant   153 GQSDSIVKD-IENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLM 216

  Fly   484 EELADPDRIRKILSGKLFPMKALGY-YAVVTGRGRKD--DSID--AIRQYEEDFFKNSKLFHRRG 543
            ::..|   ..:||.|:.|.:|   | :..|..|.:.|  .::|  |.|:.|.::|.|:..:..  
plant   217 DKGTD---AVEILEGRSFKLK---YPWVGVVNRSQADINKNVDMIAARKREREYFSNTTEYRH-- 273

  Fly   544 VIMPHQVTSRNLSLAVSDRFWKMVRETIEQQADAFKATRFNLETEWKNNFPRLRESGRDELFDKA 608
              :.:::.|.:|:..:|....::::..|.........|...||||       |...|:....| |
plant   274 --LANKMGSEHLAKMLSKHLERVIKSRIPGIQSLINKTVLELETE-------LSRLGKPIAAD-A 328

  Fly   609 KGEILDEVVTLSQISAKKWDDALSTKLWEKLSNYVFESIYLPAAQSGSQNSFNTMVDIKLRQWAE 673
            .|::    .::.:|.              :|.:.:|:. :|...::|.:..:|..         :
plant   329 GGKL----YSIMEIC--------------RLFDQIFKE-HLDGVRAGGEKVYNVF---------D 365

  Fly   674 QALPAKSVEAGWEALQQEFISLMERSKKAQDHDGIFDQLKSAVVDEAIRRHSWEDK-AIDMLR-- 735
            ..|||                                         |::|..::.: |:|.:|  
plant   366 NQLPA-----------------------------------------ALKRLQFDKQLAMDNIRKL 389

  Fly   736 VIQLNTLEDRFVHDKQEWDSAVKFLESSVNAKLVQTEETLAQMFGPGQMRRITHWQYLTQDQQKR 800
            |.:.:..:...:..:|.:.   :.:|||:           ..:.||.:                 
plant   390 VTEADGYQPHLIAPEQGYR---RLIESSI-----------VSIRGPAE----------------- 423

  Fly   801 RSVKNELDKILKNDTKHLPTLTHDELTTVRKNLQRDNVDVDTDYIRQTWFPVYRKHFLQQALQRA 865
            .||          ||.|          .:.|:|...:|: :|..::|  :|..|......|::..
plant   424 ASV----------DTVH----------AILKDLVHKSVN-ETVELKQ--YPALRVEVTNAAIESL 465

  Fly   866 KDCRKAYYLYTQQGAECEISCSDVVLFWRIQQVIKITGNALRQQVINREARRLDKEIKAVLDEFS 930
            ...|:.....|.|..:.|.|...|..|.::.|.::..||...                ::.|.::
plant   466 DKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTH----------------SIFDRYN 514

  Fly   931 DDEEKKGYLLTGKRVL 946
            |...::    .|..||
plant   515 DSYLRR----IGSNVL 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 88/283 (31%)
DL1NP_001331306.1 DLP_1 33..300 CDD:206738 88/283 (31%)
Dynamin_M 222..495 CDD:395818 70/410 (17%)
GED 513..606 CDD:128597 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11566
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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