DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opa1 and ARC5

DIOPT Version :10

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_188606.2 Gene:ARC5 / 821509 AraportID:AT3G19720 Length:777 Species:Arabidopsis thaliana


Alignment Length:830 Identity:172/830 - (20%)
Similarity:305/830 - (36%) Gaps:221/830 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 SLIDMYSEVLDELSGYDTGYTMADHL------PRVVVVGDQSSGKTSVLESIAKARIFPRGSGEM 332
            ||.:.|:|:          :.:|..|      |.|:|||.|:.||::::|::...: |....|..
plant    27 SLYEAYNEL----------HALAQELETPFEAPAVLVVGQQTDGKSALVEALMGFQ-FNHVGGGT 80

  Fly   333 MTRAPVKVTLAEGPYHVAQF------RDSDREYDLTKESDLQDLRRDVEF-RMKASVRGGKTVSN 390
            .||.|:.:.:...|.  .||      .|.|....|.|  .|..::..:|. .|:.........|.
plant    81 KTRRPITLHMKYDPQ--CQFPLCHLGSDDDPSVSLPK--SLSQIQAYIEAENMRLEQEPCSPFSA 141

  Fly   391 EVIAMTVKGPGLQRMVLVDLPGIISTMTVDMASDTKD--------SIHQMTKHYMSNPNAIILCI 447
            :.|.:.|:......:.::|.||:|:.     |...|:        ::..:.:..|.:...||||:
plant   142 KEIIVKVQYKYCPNLTIIDTPGLIAP-----APGLKNRALQVQARAVEALVRAKMQHKEFIILCL 201

  Fly   448 QDGSVDAERSNVTDLVMQCDPLGRRTIFVLTKVDL-AEELADPDRIRKILSGKLFPMKALG---- 507
            :|.| |...:....:|||.||...|||.|.||:|. ..:.:....:...||.   |..||.    
plant   202 EDSS-DWSIATTRRIVMQVDPELSRTIVVSTKLDTKIPQFSCSSDVEVFLSP---PASALDSSLL 262

  Fly   508 -----YYAVVTGR-GRKDDSI----------DAIRQYEEDFFKNSKLFHRRGVIMPHQVTSR--- 553
                 :.:|.:|| |...||:          .::|:.|:......||    |.::..|..||   
plant   263 GDSPFFTSVPSGRVGYGQDSVYKSNDEFKQAVSLREMEDIASLEKKL----GRLLTKQEKSRIGI 323

  Fly   554 -NLSLAVSDRFWKMVRET----IEQQADAFKATRFNLETEWKNNFPRLRESGRDELFDKAKGEIL 613
             .|.|.:.:..||..:|:    |......:::|...|:|..|      ..|..||...|.:|   
plant   324 SKLRLFLEELLWKRYKESVPLIIPLLGKEYRSTVRKLDTVSK------ELSSLDEAKLKERG--- 379

  Fly   614 DEVVTLSQISAKKWDDALSTKLWEKLSNYVFESIYLPAAQSGSQNSF-NTMVDIKLR-------- 669
                       :.:.|...|||          |:.|........:.| .|:.|.:.:        
plant   380 -----------RTFHDLFLTKL----------SLLLKGTVVAPPDKFGETLQDERTQGGAFVGTD 423

  Fly   670 --QWAEQALPAKSVE----AGWEALQQEFISLMERSK-------------KAQD-HDGIFDQLKS 714
              |::.:.:|...:.    |.:.....||..|:...|             ..:| |||......:
plant   424 GLQFSHKLIPNAGMRLYGGAQYHRAMAEFRFLVGAIKCPPITREEIVNACGVEDIHDGTNYSRTA 488

  Fly   715 AVVDEAIRRHSWED-------KAIDMLRVIQLNTLEDRFVHDKQEWDSA----VKFLESSVNAKL 768
            .|:..|..|.::|.       :.:.:|:  :|..:....:..:.|:.|.    :|.:.|:.|:.:
plant   489 CVIAVAKARETFEPFLHQLGARLLHILK--RLLPISVYLLQKEGEYLSGHEVFLKRVASAFNSFV 551

  Fly   769 VQTEETLAQ--MFGPGQMRRITHWQYLTQDQQKRRSVKNELDKILKNDTKHLPT--------LTH 823
            ..||::...  |.......|...|   :...:.|..::..||..  ..|:|..|        |..
plant   552 ESTEKSCRDKCMEDLASTTRYVTW---SLHNKNRAGLRQFLDSF--GGTEHNTTSGNAIGFSLPQ 611

  Fly   824 DELTTVRKNLQRDNV-------DVDTDYIRQT-------------W----FP-----VYRKHFLQ 859
            |.|........|.:|       ::|:....||             |    .|     ||.  .:|
plant   612 DALGGTTDTKSRSDVKLSHLASNIDSGSSIQTTEMRLADLLDSTLWNRKLAPSSERIVYA--LVQ 674

  Fly   860 QALQRAKDCRKAYYLYTQQGAECEISCSDVVLFWRIQQVIKITGNALRQQVINREARRLDKEIKA 924
            |..|..::    |:|   ..||.:.:|      :.:..::......||:::.|    ..:.::.:
plant   675 QIFQGIRE----YFL---ASAELKFNC------FLLMPIVDKLPALLREELEN----AFEDDLDS 722

  Fly   925 VLD----EFSDDEEKKGYLLTGKRVLLAEELIKVRQIQEKL--EEFINSL 968
            :.|    ..|.|::|:...:..:|:...:|  |.|.:.|||  .||..:|
plant   723 IFDITNLRQSLDQKKRSTEIELRRIKRIKE--KFRVMNEKLNSHEFAQNL 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 78/323 (24%)
OPA1_C 629..972 CDD:466080 79/425 (19%)
ARC5NP_188606.2 DLP_1 49..343 CDD:206738 77/311 (25%)

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