DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Opa1 and Mx2

DIOPT Version :9

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_599177.2 Gene:Mx2 / 286918 RGDID:628821 Length:659 Species:Rattus norvegicus


Alignment Length:740 Identity:160/740 - (21%)
Similarity:298/740 - (40%) Gaps:169/740 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 SLIDMYSE-------VLDELSGYDTGYTMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGE 331
            :|...|.|       ::|.|........:|  ||.:.|:|||||||:||||:::...: ||||| 
  Rat    38 NLCSQYEEKVRPCIDLIDSLRALGVEQDLA--LPAIAVIGDQSSGKSSVLEALSGVAL-PRGSG- 98

  Fly   332 MMTRAPVKVTLA---EGPYHVAQFRDSDREYDLTKESDLQDLRRDVEFRMKASVRGGKTVSNEVI 393
            ::||.|:.:.|.   :|.....:....|.|.:|:..|::::.....:..: |.|  |..:|:::|
  Rat    99 IVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHI-AGV--GLGISDKLI 160

  Fly   394 AMTVKGPGLQRMVLVDLPGIISTMTVDMASDTKDSIHQMTKHYMSNPNAIILCIQDGSVDAERSN 458
            ::.|..|.:..:.|:|||||......:..:|....|.::..:|:.....|.|.:...:||...:.
  Rat   161 SLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLITNYIQKQETINLVVVPSNVDIATTE 225

  Fly   459 VTDLVMQCDPLGRRTIFVLTKVDLAEELADPDRIRKILSGKLFPMKALGYYAVVTGRGRKDD--- 520
            ...:..:.||.|.|||.:|||.||.:. ...|::..::...:..:|.  .|.:|..||::|.   
  Rat   226 ALSMAQKVDPDGDRTIGILTKPDLVDR-GTEDKVVDVVRNLVCHLKK--GYMIVKCRGQQDIQEQ 287

  Fly   521 -SIDAIRQYEEDFFKNSKLFHRRGVIMPHQVT----SRNLSLAVSDRFWKMVRETIEQQADAFKA 580
             |:....|.|:.|||....|  |.::...:.|    :..|::.:.....|.:.....|..::.::
  Rat   288 LSLAEALQKEQVFFKEHPQF--RALLEDGKATVPCLAERLTMELISHICKSLPLLENQIKESHQS 350

  Fly   581 TRFNLETEWKNNFPRLRESGRDELFDK--AKGEILDEVVTLSQISAKKWDDALSTKLWEKLSNYV 643
            |...|: ::..:.|.........|.:|  |..:.:..:|...:|..:|     ..:|:.||....
  Rat   351 TSEELQ-KYGADIPEDENEKTLFLIEKINAFNQDITAIVEGEEIVREK-----ECRLFTKLRKEF 409

  Fly   644 FESIYLPAAQSGSQNSFNTMVDIKLRQWAEQALPAKSVEAGWEALQQEFISLMERSKKAQDHDGI 708
            |                         .|:|:.  .::.:.|.:||.:| :...|...:.::..| 
  Rat   410 F-------------------------LWSEEI--ERNFQKGSDALYKE-VYTFEMQYRGRELPG- 445

  Fly   709 FDQLKSAVVDEAIRRHSWEDKAIDMLRVIQLNTLEDRFVHDKQEWDSAVKFLESSVNAKLVQTEE 773
            |...|:  .:..|||              |:.|||:..:....:....|:...::|      :|:
  Rat   446 FVNYKT--FENIIRR--------------QIKTLEEPAMEMLHKVTEIVRAAFTTV------SEK 488

  Fly   774 TLAQMFGPGQMRRITHWQYLTQDQQKRRSVKNELDKI-LKNDTKHLPTLTHDELTTVRKNLQRDN 837
            ..::.|                  ...|:.|::|:.| |:.:|        :....:|.:.|.:.
  Rat   489 NFSEFF------------------NLHRTTKSKLEDIRLEQET--------EAEKAIRLHFQMEQ 527

  Fly   838 VDVDTDYIRQTWFPVYRKHFLQQALQRAK------DCRKAYYLYTQQGAECEISCSDVVLFWRIQ 896
            :....|.|       |||     |||:.:      :.||.....:.|....:.|..|.:    .|
  Rat   528 IIYCQDQI-------YRK-----ALQKVREEEAEEEERKHGKSRSAQSPNLQTSSMDEI----FQ 576

  Fly   897 QVIKITGNALRQQ----------------VINREARRLDKEIKAVLDEFSDDEEKKGYLL----- 940
            .:     ||.||:                ::...|.:|.|.:..:|    .|::...:||     
  Rat   577 HL-----NAYRQEAHNCISSHIPLIIQYFILKMFAEKLQKGMLQLL----QDKDSCSWLLKEKSD 632

  Fly   941 -TGKRVLLAEELIKVRQIQEKLEEF 964
             :.||..|.|.|.::.|.|.:|.:|
  Rat   633 TSEKRRFLKERLARLAQAQRRLAKF 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 77/284 (27%)
Mx2NP_599177.2 DLP_1 66..338 CDD:206738 78/283 (28%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 75..82 6/6 (100%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 100..102 0/1 (0%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 176..179 2/2 (100%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 245..248 2/2 (100%)
Dynamin_M 258..544 CDD:395818 68/384 (18%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 277..280 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 547..568 3/20 (15%)
GED 569..657 CDD:396682 22/100 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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