DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Opa1 and dnm1

DIOPT Version :9

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_596014.1 Gene:dnm1 / 2540159 PomBaseID:SPBC12C2.08 Length:781 Species:Schizosaccharomyces pombe


Alignment Length:847 Identity:176/847 - (20%)
Similarity:315/847 - (37%) Gaps:225/847 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 KSLIDMYSEVLDELSGYDT-GYTMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGEMMTRA 336
            :.||.:.:::.|.:  |:| |....| ||.:||||.||.||:||||:|......|||:| ::||.
pombe     2 EQLIPLVNQLQDLV--YNTIGSDFLD-LPSIVVVGSQSCGKSSVLENIVGKDFLPRGTG-IVTRR 62

  Fly   337 PV-------------------------KVTLAEGPYHVAQ--FRDSDREYDL--------TKESD 366
            |:                         :.|.|.|.....:  ..|||...|.        ||.:|
pombe    63 PLILQLINLKRKTKNNHDEESTSDNNSEETSAAGETGSLEGIEEDSDEIEDYAEFLHIPDTKFTD 127

  Fly   367 LQDLRRDVEFRMKASVRGGKTVSNEVIAMTVKGPGLQRMVLVDLPGIISTMTVDMASDTKDSIHQ 431
            :..:|.::|..........|.::...|.:.:....:..:.|:||||:......|..:|.:.....
pombe   128 MNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVGDQPTDIEAQTRS 192

  Fly   432 MTKHYMSNPNAIILCIQDGSVDAERSNVTDLVMQCDPLGRRTIFVLTKVDLAEELADPDRIRKIL 496
            :...|:|.||:|||.:...:.|...|....|....||.|:|||.||||:||.::   ......||
pombe   193 LIMEYISRPNSIILAVSPANFDIVNSEGLKLARSVDPKGKRTIGVLTKLDLMDQ---GTNAMDIL 254

  Fly   497 SGKLFPMKALGYYAVVTGRGRKD-----DSIDAIRQYEEDFFKNSKLFH----RRGVIMPHQV-T 551
            ||:::|:| ||:.|.| .|.:.|     ...||: |.|..||::...:.    |.|.  |:.. |
pombe   255 SGRVYPLK-LGFVATV-NRSQSDIVSHKSMRDAL-QSERSFFEHHPAYRTIKDRCGT--PYLAKT 314

  Fly   552 SRNLSLA--------VSDRFWKMVRETIEQQADAFKATRFNLETEW------------------- 589
            ..||.::        :..|...::.:| :||.:.:...:.:.:::.                   
pombe   315 LSNLLVSHIRERLPDIKARLSTLISQT-QQQLNNYGDFKLSDQSQRGIILLQAMNRFANTFIASI 378

  Fly   590 ---KNNFPRLRESGRDEL---FDKAKGEILDEVVTLSQISAKKWDDALSTKLWEK----LSNYVF 644
               .:|.|....||...|   |:......|:.:..|..:|......|:......:    ||...|
pombe   379 DGNSSNIPTKELSGGARLYSIFNNVFTTALNSIDPLQNLSTVDIRTAILNSTGSRATLFLSEMAF 443

  Fly   645 ESIYLPAAQ-----------------------SGS---------QNSFNTMVDIKLRQWAEQALP 677
            :.:..|...                       ||.         |.:....|...||   |...|
pombe   444 DILVKPQLNLLAAPCHQCVELVYEELMKICHYSGDSDISHFPKLQTALVETVSDLLR---ENLTP 505

  Fly   678 AKSVEAGWEALQQEFIS---------------LMERSKK-----AQDHDGIFDQLKSAVVDEAIR 722
            ..|......|:|..:|:               ::.|.::     :|::|.........|..:.|.
pombe   506 TYSFVESLIAIQSAYINTNHPDFLGVQGAMAVVLSRKEQNRLMLSQENDEPISSALDTVKPDGIE 570

  Fly   723 RHSWED----KAIDMLRVIQLNTLEDRFVHDKQEWD-SAVKFLESSVNAKLVQTEETLAQMFGPG 782
            .:|.:.    |:|......::.||:.......|..| .|.|...::.:.:..:.:..|:.:||..
pombe   571 LYSSDPDTSVKSITNKATNEITTLKSDDSAKMQPLDVLASKRYNNAFSTETAERKTFLSYVFGAN 635

  Fly   783 QMRRITHWQYLTQDQQKRRSVKNELDKILKNDTKH-------LPTLTHDELTTVRKNL-QRDNVD 839
            ...|    :.::.|:.....:.   |.:...||.|       :..|:::..|...::: :|:.|:
pombe   636 NATR----KAMSIDKSSSYPLN---DSLSGGDTNHKNNHPLKMTDLSNEVETMALEDMSEREEVE 693

  Fly   840 VDTDYIRQTWFPVYRKHFLQQALQRAKDCRKAYYLYTQQGAECEISCSDVVLFWRIQQVI-KITG 903
            ||.                      .|:...:|:..|::           ::..::.:|| .:..
pombe   694 VDL----------------------IKELITSYFNLTRK-----------IIIDQVPKVIMHLLV 725

  Fly   904 NALRQQVINREARRLDKEIKAVLDEFSDDEEKKGYLLTGKRVLLAEELIKVRQIQEKLEEFINSL 968
            ||.:..:.||...:|.:|      :|.|            .:|:.:|  .|:..:||.|..::..
pombe   726 NASKDAIQNRLVSKLYRE------DFFD------------TLLIEDE--NVKSEREKCERLLSVY 770

  Fly   969 NQ 970
            ||
pombe   771 NQ 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 91/326 (28%)
dnm1NP_596014.1 DLP_1 24..328 CDD:206738 90/313 (29%)
CrfC 112..779 CDD:223771 141/733 (19%)
Dynamin_M 251..536 CDD:279383 54/293 (18%)
GED 689..780 CDD:128597 25/137 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11566
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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