DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Opa1 and dnm1

DIOPT Version :10

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_596014.1 Gene:dnm1 / 2540159 PomBaseID:SPBC12C2.08 Length:781 Species:Schizosaccharomyces pombe


Alignment Length:847 Identity:176/847 - (20%)
Similarity:315/847 - (37%) Gaps:225/847 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 KSLIDMYSEVLDELSGYDT-GYTMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGEMMTRA 336
            :.||.:.:::.|.:  |:| |....| ||.:||||.||.||:||||:|......|||:| ::||.
pombe     2 EQLIPLVNQLQDLV--YNTIGSDFLD-LPSIVVVGSQSCGKSSVLENIVGKDFLPRGTG-IVTRR 62

  Fly   337 PV-------------------------KVTLAEGPYHVAQ--FRDSDREYDL--------TKESD 366
            |:                         :.|.|.|.....:  ..|||...|.        ||.:|
pombe    63 PLILQLINLKRKTKNNHDEESTSDNNSEETSAAGETGSLEGIEEDSDEIEDYAEFLHIPDTKFTD 127

  Fly   367 LQDLRRDVEFRMKASVRGGKTVSNEVIAMTVKGPGLQRMVLVDLPGIISTMTVDMASDTKDSIHQ 431
            :..:|.::|..........|.::...|.:.:....:..:.|:||||:......|..:|.:.....
pombe   128 MNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVGDQPTDIEAQTRS 192

  Fly   432 MTKHYMSNPNAIILCIQDGSVDAERSNVTDLVMQCDPLGRRTIFVLTKVDLAEELADPDRIRKIL 496
            :...|:|.||:|||.:...:.|...|....|....||.|:|||.||||:||.::   ......||
pombe   193 LIMEYISRPNSIILAVSPANFDIVNSEGLKLARSVDPKGKRTIGVLTKLDLMDQ---GTNAMDIL 254

  Fly   497 SGKLFPMKALGYYAVVTGRGRKD-----DSIDAIRQYEEDFFKNSKLFH----RRGVIMPHQV-T 551
            ||:::|:| ||:.|.| .|.:.|     ...||: |.|..||::...:.    |.|.  |:.. |
pombe   255 SGRVYPLK-LGFVATV-NRSQSDIVSHKSMRDAL-QSERSFFEHHPAYRTIKDRCGT--PYLAKT 314

  Fly   552 SRNLSLA--------VSDRFWKMVRETIEQQADAFKATRFNLETEW------------------- 589
            ..||.::        :..|...::.:| :||.:.:...:.:.:::.                   
pombe   315 LSNLLVSHIRERLPDIKARLSTLISQT-QQQLNNYGDFKLSDQSQRGIILLQAMNRFANTFIASI 378

  Fly   590 ---KNNFPRLRESGRDEL---FDKAKGEILDEVVTLSQISAKKWDDALSTKLWEK----LSNYVF 644
               .:|.|....||...|   |:......|:.:..|..:|......|:......:    ||...|
pombe   379 DGNSSNIPTKELSGGARLYSIFNNVFTTALNSIDPLQNLSTVDIRTAILNSTGSRATLFLSEMAF 443

  Fly   645 ESIYLPAAQ-----------------------SGS---------QNSFNTMVDIKLRQWAEQALP 677
            :.:..|...                       ||.         |.:....|...||   |...|
pombe   444 DILVKPQLNLLAAPCHQCVELVYEELMKICHYSGDSDISHFPKLQTALVETVSDLLR---ENLTP 505

  Fly   678 AKSVEAGWEALQQEFIS---------------LMERSKK-----AQDHDGIFDQLKSAVVDEAIR 722
            ..|......|:|..:|:               ::.|.::     :|::|.........|..:.|.
pombe   506 TYSFVESLIAIQSAYINTNHPDFLGVQGAMAVVLSRKEQNRLMLSQENDEPISSALDTVKPDGIE 570

  Fly   723 RHSWED----KAIDMLRVIQLNTLEDRFVHDKQEWD-SAVKFLESSVNAKLVQTEETLAQMFGPG 782
            .:|.:.    |:|......::.||:.......|..| .|.|...::.:.:..:.:..|:.:||..
pombe   571 LYSSDPDTSVKSITNKATNEITTLKSDDSAKMQPLDVLASKRYNNAFSTETAERKTFLSYVFGAN 635

  Fly   783 QMRRITHWQYLTQDQQKRRSVKNELDKILKNDTKH-------LPTLTHDELTTVRKNL-QRDNVD 839
            ...|    :.::.|:.....:.   |.:...||.|       :..|:::..|...::: :|:.|:
pombe   636 NATR----KAMSIDKSSSYPLN---DSLSGGDTNHKNNHPLKMTDLSNEVETMALEDMSEREEVE 693

  Fly   840 VDTDYIRQTWFPVYRKHFLQQALQRAKDCRKAYYLYTQQGAECEISCSDVVLFWRIQQVI-KITG 903
            ||.                      .|:...:|:..|::           ::..::.:|| .:..
pombe   694 VDL----------------------IKELITSYFNLTRK-----------IIIDQVPKVIMHLLV 725

  Fly   904 NALRQQVINREARRLDKEIKAVLDEFSDDEEKKGYLLTGKRVLLAEELIKVRQIQEKLEEFINSL 968
            ||.:..:.||...:|.:|      :|.|            .:|:.:|  .|:..:||.|..::..
pombe   726 NASKDAIQNRLVSKLYRE------DFFD------------TLLIEDE--NVKSEREKCERLLSVY 770

  Fly   969 NQ 970
            ||
pombe   771 NQ 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 91/326 (28%)
OPA1_C 629..972 CDD:466080 67/412 (16%)
dnm1NP_596014.1 DLP_1 24..328 CDD:206738 90/313 (29%)
Dynamin_M 249..536 CDD:460033 54/295 (18%)
GED 690..780 CDD:460495 24/136 (18%)

Return to query results.
Submit another query.