DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opa1 and shi

DIOPT Version :10

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:XP_061497779.1 Gene:shi / 1272935 VectorBaseID:AGAMI1_014983 Length:925 Species:Anopheles gambiae


Alignment Length:787 Identity:177/787 - (22%)
Similarity:317/787 - (40%) Gaps:166/787 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 KSLIDMYSEVLDELSGYDTGYTMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGEMMTRAP 337
            :|||.:.:::.|..:  ..|..|...||::.|||.||:||:||||:.......||||| ::||.|
Mosquito     2 ESLIPIVNKLQDAFT--QMGVHMQLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG-IVTRRP 63

  Fly   338 VKVTLAEGPYHVAQFRDSDREYDLTKESDLQDLRRDVEFRMKASVRGGKTVSNEVIAMTVKGPGL 402
            :.:.|..|.....:|.....:    |.|:.:::|:::|..........|.:||..|.:.|..|.:
Mosquito    64 LILQLINGTVEFGEFLHQKGK----KFSNFEEIRQEIEAETDRITGSNKGISNIPINLRVYSPHV 124

  Fly   403 QRMVLVDLPGIISTMTVDMASDTKDSIHQMTKHYMSNPNAIILCIQDGSVDAERSNVTDLVMQCD 467
            ..:.|:||||:......|..:|.::.|..|...::.....:||.:...:.|...|:...|..:.|
Mosquito   125 LNLTLIDLPGLTKVPIGDQPADIENQIKGMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVD 189

  Fly   468 PLGRRTIFVLTKVDLAEELADPDRIRKILSGKLFPMKALGYYAVVTG-----RGRKDDSIDAIRQ 527
            |.|.|||.|:||:||.:|..|   .|.||..||.|::. ||..||..     .||||  |.|...
Mosquito   190 PQGVRTIGVITKLDLMDEGTD---ARDILENKLLPLRR-GYIGVVNRSQKDIEGRKD--IHAALA 248

  Fly   528 YEEDFFKNSKLFH----RRGV-----IMPHQVTS--RNLSLAVSDRFWKMVRETIEQQADAFKAT 581
            .|..||.:...:.    |.|.     ::..|:|:  |:...|:.||..|.:. |:|:..|.:|..
Mosquito   249 AERKFFLSHPSYRHIADRLGTPYLQKVLNQQLTNHIRDTLPALRDRLQKQML-TLEKDVDQYKHF 312

  Fly   582 R-----------FNLETEWKNNFPRLRE-SG-----RDELFDKAK-GEILDEVVTLSQISAKKWD 628
            |           ..:..:.:::|.|..| ||     .:||...|| ..|..|.:....:.....:
Mosquito   313 RPDDPSIKTKAMLQMIQQLQSDFERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMSCDE 377

  Fly   629 DALSTKLWEKLSNY--VFESIYLPAAQSGSQNSFNTMVDIKLRQWAEQALPAKSVEAGWEALQQE 691
            ..|..::...:.|.  :...::.|      ..:|..:|..::.|..|..|  |.|:         
Mosquito   378 KELRREISFAIRNIHGIRVGLFTP------DMAFEAIVKKQISQLKEPIL--KCVD--------- 425

  Fly   692 FISLMERSKKAQ---DHDGIFDQLKSAVVDEAIRRH--SWEDKAIDMLRVI------QLNTLEDR 745
             ::::|.|...:   |....:.:|:.. .:..|..|  ..|.||.:.:.::      .:||..:.
Mosquito   426 -LTVLELSNVVRICTDKMARYPRLRDE-TERIITTHIRQCEQKAKEQMMLLIDYELAYMNTNHED 488

  Fly   746 FV---HDKQEWDSAVKFLESSVNAKLVQTEETLAQMFGPGQMRRITHWQYLT--------QDQQK 799
            |:   :.:.:.::|||....::.:::::......|..|..:.....:|..||        .:.:|
Mosquito   489 FIGFANAQSKTENAVKTGTRNLGSQVIRKGHMCIQNLGIMKGGSRPYWFVLTSESISWFKDEDEK 553

  Fly   800 RRSVKNELDKILKND-------TKHLPTLTHDELTTVRKNLQR--------DNVDVDTDYIRQTW 849
            .:.....||.:...|       .:|...|.:.:...|.|:.::        |:||        :|
Mosquito   554 EKKFMLPLDGLKLRDIEQGFMSRRHTFGLFNPDGRNVYKDYKQLELSCESTDDVD--------SW 610

  Fly   850 FPVYRKHFLQQALQRAKDC---RKAYYLYTQQGAECEISCSD----------------------- 888
                :..||:..:...||.   .....|..||....::|.:|                       
Mosquito   611 ----KASFLRAGVYPEKDTPANGDEKLLSHQQSLVDDVSKTDTEESGGESGPTGQSLDPQLERQV 671

  Fly   889 ------VVLFWRIQQVIKITGN----ALRQQVINREARRLDKEIKA----------VLDEFSDDE 933
                  |..:.||  |.|.|.:    |:...:||.....::.|:.|          :::|.:|:.
Mosquito   672 ETIRNLVESYMRI--VTKTTRDMVPKAIMMLIINNTKDFINGELLAHLYATGDQASMMEESADEA 734

  Fly   934 EKKGYLL 940
            :|:..:|
Mosquito   735 QKREEML 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 90/289 (31%)
OPA1_C 629..972 CDD:466080 66/397 (17%)
shiXP_061497779.1 None

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