DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8468 and kar

DIOPT Version :9

Sequence 1:NP_610940.1 Gene:CG8468 / 36577 FlyBaseID:FBgn0033913 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster


Alignment Length:638 Identity:119/638 - (18%)
Similarity:192/638 - (30%) Gaps:245/638 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PPDSG-WAWVVMVASFLCCTVIDGIVFCSGLIQEQL---MAEFG----VSKAYVAFVSSLLSGCY 99
            |||.| .||:|||::|||..:|.|.:...|:|...|   :.:.|    .|||  |.:.:|..|..
  Fly    73 PPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKA--ALIGALAIGTT 135

  Fly   100 LMAGPFVSAMANRFGFRPVTITGAIFAAICFGLSYFAT-SVEYLFLIYGVLGGIGFCMVYIPAVV 163
            .:.......:.::.|.|..|..|.:.:|....||.|.| ::..|:..||::.|:|..:.|.|.:.
  Fly   136 FLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLA 200

  Fly   164 IIGFYFEKWRALATGVAMCGSGVGTFVFAP-LTKILLKSGWRYTLAIQGIIVLSCALFGLAFRPI 227
            |:|.||:::....:|....||.|.|.:..| |.|:|...|...||.|..::.....|....::|:
  Fly   201 ILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPL 265

  Fly   228 QPITLSVTNEEGDEQEKKKLNGHGNTVAPTPQLHQAAFTKPLPEGRFAYSMPNSAHNTYMGASQR 292
            .|                                                               
  Fly   266 HP--------------------------------------------------------------- 267

  Fly   293 NHYPTAQEIFKGMNLERRPSGTAQGSKGTELKQLRKSQPTTPNGDPQQLTFNLHKELTTVGENEE 357
                                                 .|..|...|.:...||.           
  Fly   268 -------------------------------------PPEPPKKKPGRSRINLF----------- 284

  Fly   358 EAENDNLLETEAKPVTIQARRHTVSGRRPQDIGKRSAAAAHEAHHGQSHSSSRPMYRDDIFFSGS 422
                                                                             
  Fly   285 ----------------------------------------------------------------- 284

  Fly   423 LTRIPQYQSQTSLAYHMSVTRLPTKQDMLEDRQKGCRICPEAVRRTLSTMLDTTLLKSPAFMCLA 487
                                                          |.::::..:.|...|:..|
  Fly   285 ----------------------------------------------LRSIINVEIWKRKRFVIWA 303

  Fly   488 FSGFLTMMGFFVPFTFLVDRAKAAGMDEQA-----AYGVLSGIGVVNTFARIVCGSLSSFPAVKP 547
            ....|.:.|:|||:..::...|.....|..     ..|:.||||      |::.|.::..|.|..
  Fly   304 LCVPLALFGYFVPYVHMMQFVKTTFPGEDVNLPVMCIGITSGIG------RLIFGVIADMPGVNR 362

  Fly   548 LWLNNFALTAGGIATICSGIVINTATQWTFALFFGICIACFSALRSLIAVELIGLEKLTNAYGFL 612
            ::|...:|.:.|:.|:...:..:.....:|.|..|:...||.:|...||.|:.|....|.|.|||
  Fly   363 MYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFL 427

  Fly   613 MLFQGLAATFGSPIAGGLYVMTGSYNAAFYFAGGLILLSAFLCYPLTWVSRWE 665
            :....:..|.|.|:||.::..|.||......||...||.:.|.:.:..|...|
  Fly   428 LGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIKCVKEEE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8468NP_610940.1 MFS 50..>227 CDD:119392 53/185 (29%)
MFS <481..658 CDD:119392 50/181 (28%)
karNP_001189213.1 MFS 81..459 CDD:119392 107/607 (18%)
MFS_1 124..439 CDD:284993 85/544 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I2205
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.891027 Normalized mean entropy S3509
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.870

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