DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8468 and slcf-1

DIOPT Version :10

Sequence 1:NP_610940.1 Gene:CG8468 / 36577 FlyBaseID:FBgn0033913 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_509762.2 Gene:slcf-1 / 186633 WormBaseID:WBGene00010340 Length:450 Species:Caenorhabditis elegans


Alignment Length:231 Identity:54/231 - (23%)
Similarity:82/231 - (35%) Gaps:65/231 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AVV---VPPDSGW--AWVVMVASFLCCTVIDGIVFCSGLIQEQLMAEFGVSKAYVAFVSSLLS-- 96
            |||   .|..|.|  .||.:...::                  |.||.||.:....||..::.  
 Worm    22 AVVFDDTPQPSEWRNIWVAICGFYI------------------LFAETGVRQVMNGFVEPVIKTY 68

  Fly    97 GC----------------YLMAGPFVSAMANRFGFRPVTITGAIFAAICFGLSYFATSVEYLFLI 145
            .|                .|:.|||.|....|.|.|...|.|:......|.:..|..:: ||.::
 Worm    69 NCTKDQADTAVLVVPMASSLILGPFCSIFYQRSGARISIIAGSFLTGGSFVVGPFCKNI-YLLML 132

  Fly   146 --YGVLGGIGFCMVYIPAVVIIGFYFEKWRALATGVAMCGSGVGTFVFAPLTKILL-------KS 201
              :|:  |||..::....:.|...||:|.|.........|.|:|.|:.....|.::       .:
 Worm   133 ATFGM--GIGCGLMRNSIISIQCEYFKKKRNTVMAAISIGPGLGIFILPRTLKFIMVKYNSWGPA 195

  Fly   202 GWRYTL-----AIQGIIV-------LSCALFGLAFR 225
            .|..:|     ||.|:.:       .|...||.||:
 Worm   196 WWFLSLFYIVSAIMGLFITKPPSEQTSTFSFGSAFK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8468NP_610940.1 MFS_MCT_SLC16 49..>225 CDD:340910 47/214 (22%)
MFS <477..658 CDD:475125
slcf-1NP_509762.2 MFS 84..412 CDD:475125 38/151 (25%)
Blue background indicates that the domain is not in the aligned region.

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