DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8468 and gem-1

DIOPT Version :9

Sequence 1:NP_610940.1 Gene:CG8468 / 36577 FlyBaseID:FBgn0033913 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001379120.1 Gene:gem-1 / 181458 WormBaseID:WBGene00008214 Length:771 Species:Caenorhabditis elegans


Alignment Length:726 Identity:151/726 - (20%)
Similarity:279/726 - (38%) Gaps:128/726 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PENIKEENEGEEEIEEAAV-VVPPDSGWAWVVMVASFLCCTVIDGIVFCSGLIQEQLMAEFGVSK 85
            |.:.:.::...|.:|.... .|..|.|:.|:|::||||...|.||..||.|::..::...|...:
 Worm    44 PVSARSDDSDAESVESLTERPVYKDGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHFQCGR 108

  Fly    86 AYVAFVSSLLSGCYLMAGPFVSAMANRFGFRPVTITGAIFAAICFGLSYFATSVEYLFLIYGVLG 150
            ......:|:.....|:..|....:::..|.|...|.||....:...::.|.:.:.:..:.:|:..
 Worm   109 FVSMITASMFLSLPLIMSPVAGIVSDILGCRMSIIIGASICTVSCIIAMFCSHIFFFMISFGLGC 173

  Fly   151 GIGFCMVYIPAVVIIGFYFEKWRALATGVAMCGSGVGTFVFAPLTKILLKSGWRYTLAIQGIIVL 215
            |:|...:|..|:||:.:||||.|.|||..|:.|:||||.::    .|||.....|..:....|.:
 Worm   174 GVGMSFIYNAAIVIVTYYFEKRRGLATSFAVSGTGVGTVIY----PILLNLSMIYLASFVSDIRI 234

  Fly   216 SCALFGLAFRPIQPITLSVTNEE--------------------GDEQEKKKLNGHGNTVAPTPQL 260
            ....|.:.:..|..|...:.:.|                    .||:|        |...||.  
 Worm   235 ILIFFAVMYFVIAVIGFFIKDVEWESDKTDFKLRKFQKYIAKMDDEKE--------NNTNPTD-- 289

  Fly   261 HQAAFTKPLPEGRFAYSMPN-SAHNTYMG----------ASQRNHYPTAQE---IFKG------- 304
               ||.      |.|.|:|| :..|.:.|          |.:::..||..:   :|..       
 Worm   290 ---AFM------RHAISLPNLNILNNHSGSIQSICDAAKAERKSDKPTRSKSVALFDNKHQMSSI 345

  Fly   305 -----------------MNLERRPSGTAQGSKGTELKQLRKSQPTTPNGDPQQLTFNLHKELTTV 352
                             :.|...|..|.:..:...:.::..|.......:.:....||.:..|..
 Worm   346 PEYSMLNTNLANLEHLDLELANSPCTTVRAQRRRVISKVSMSVDQINELEDEAFHINLFQSSTES 410

  Fly   353 GENEEEAENDNLLETEAKPVTIQARRHTVSGRRPQDIGKRSAAAAHEAHHGQSHSSSRPMYRDDI 417
            ..::|.:.:|:.:..:....:.:.....:.....:.|.|.....|..|  ..|..:|..|.|:.:
 Worm   411 ESDDESSSDDSEMSNDGDSSSSELSEKNLDEPTTKLINKNLENVAFRA--TSSVPNSARMNRNSV 473

  Fly   418 ------FFSGSLTRIPQYQSQ--TSLAYHMSVTRLPTKQDMLEDRQKGCRICPEAVRRTLSTMLD 474
                  .|.|.:......||:  |:|   :::.::|: ..||..|:....:..:.::......|:
 Worm   474 AAGTSNMFGGRVIASNAIQSRHATNL---IAMGKIPS-APMLVARKNRKSMIGKPIQGFYKKWLE 534

  Fly   475 T------TLLKSPAFMCLAFSGFLTMMGFFVPFT----FLVDRAKAAGMDEQAAYGVLSGIGVVN 529
            |      .::...|::.||.|.........||:.    :.:|..|   |:|..|..:...||:.|
 Worm   535 TEKPIYQEVIHCRAYIYLALSVLCLYFILDVPYVCFYEYSIDTLK---MEESEANYIYYSIGISN 596

  Fly   530 TFARIVCGSLSSFPAVKPLWLNNFALTAGGIATICSGIVINTATQWT-------FALFFGICIAC 587
            ..:.::.|:|:.       |......|....:.:..||.|..:|:..       ..:.||:.|..
 Worm   597 FISVLLFGTLAD-------WTRKHITTIYASSMVGVGITIMFSTRINSLVELVIVGVCFGVTITS 654

  Fly   588 FSALRSL---IAVELIGLEKLTNAYGFLMLFQGLAATFGSPIAGGLYVMTGSYNAAFYFAGGLIL 649
            ...|:|:   |..|.:.|.::  ||..:.:.:|:|:..|.||...:...||.|...|:.:|...|
 Worm   655 NYVLQSILVTICFEDVNLFQV--AYSLIAMIEGVASLIGPPIFALVREATGGYTVVFFISGIFAL 717

  Fly   650 LSAFLCYPLTW 660
            .|.|..:..::
 Worm   718 ASGFFGFMFSY 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8468NP_610940.1 MFS 50..>227 CDD:119392 49/176 (28%)
MFS <481..658 CDD:119392 45/190 (24%)
gem-1NP_001379120.1 MFS 72..>254 CDD:421695 51/185 (28%)
MFS <543..727 CDD:421695 45/195 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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