DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS23 and rpsL

DIOPT Version :10

Sequence 1:NP_610939.2 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_417801.1 Gene:rpsL / 947845 ECOCYCID:EG10911 Length:124 Species:Escherichia coli


Alignment Length:124 Identity:35/124 - (28%)
Similarity:59/124 - (47%) Gaps:32/124 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIR 67
            |||..:.|:.:|                   ...:|.|     ..:|:.........|:||||:|
E. coli    10 KPRARKVAKSNV-------------------PALEACP-----QKRGVCTRVYTTTPKKPNSALR 50

  Fly    68 KCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 126
            |..||:| .||.::|:::..:|  :.::|:..:|:.| ||    |.|:||||:..|:.|
E. coli    51 KVCRVRL-TNGFEVTSYIGGEG--HNLQEHSVILIRG-GR----VKDLPGVRYHTVRGA 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_610939.2 PTZ00067 1..143 CDD:185422 35/124 (28%)
rpsLNP_417801.1 RpsL 1..124 CDD:439818 35/124 (28%)

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