DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS23 and mrps12

DIOPT Version :10

Sequence 1:NP_610939.2 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_001373202.1 Gene:mrps12 / 793878 ZFINID:ZDB-GENE-091204-48 Length:143 Species:Danio rerio


Alignment Length:90 Identity:32/90 - (35%)
Similarity:54/90 - (60%) Gaps:8/90 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDE 99
            |.|.:...|....|.:||:.:..:.|:||||.|||.:|:| .||::...::|.:|  :.::|::.
Zfish    49 RRKISATFGHPQLKAVVLKTMIRKPKKPNSANRKCAQVRL-SNGQEAVVYIPGEG--HNLQEHNV 110

  Fly   100 VLVAGFGRKGHAVGDIPGVRFKVVK 124
            |||.| ||    ..|:|||:..|::
Zfish   111 VLVQG-GR----TQDLPGVKLAVIR 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_610939.2 PTZ00067 1..143 CDD:185422 32/90 (36%)
mrps12NP_001373202.1 Ribosomal_S12 35..141 CDD:239466 32/90 (36%)

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