DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS23 and mrps12

DIOPT Version :9

Sequence 1:NP_001286410.1 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_001373202.1 Gene:mrps12 / 793878 ZFINID:ZDB-GENE-091204-48 Length:143 Species:Danio rerio


Alignment Length:90 Identity:32/90 - (35%)
Similarity:54/90 - (60%) Gaps:8/90 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDE 99
            |.|.:...|....|.:||:.:..:.|:||||.|||.:|:| .||::...::|.:|  :.::|::.
Zfish    49 RRKISATFGHPQLKAVVLKTMIRKPKKPNSANRKCAQVRL-SNGQEAVVYIPGEG--HNLQEHNV 110

  Fly   100 VLVAGFGRKGHAVGDIPGVRFKVVK 124
            |||.| ||    ..|:|||:..|::
Zfish   111 VLVQG-GR----TQDLPGVKLAVIR 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_001286410.1 PTZ00067 1..143 CDD:185422 32/90 (36%)
mrps12NP_001373202.1 Ribosomal_S12 35..141 CDD:239466 32/90 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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