DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS23 and mrps12

DIOPT Version :10

Sequence 1:NP_610939.2 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:XP_017951776.2 Gene:mrps12 / 733781 XenbaseID:XB-GENE-969291 Length:211 Species:Xenopus tropicalis


Alignment Length:88 Identity:37/88 - (42%)
Similarity:56/88 - (63%) Gaps:8/88 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVL 101
            |..|..|....||:||:.:..:.|:||||.|||.||:| .|||::..|:|.:|  :.::|::.||
 Frog   120 KLGPTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNIVL 181

  Fly   102 VAGFGRKGHAVGDIPGVRFKVVK 124
            |.| ||    ..|:|||:.|:|:
 Frog   182 VEG-GR----TQDLPGVKLKIVR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_610939.2 PTZ00067 1..143 CDD:185422 37/88 (42%)
mrps12XP_017951776.2 Ribosomal_S12 104..210 CDD:239466 37/88 (42%)

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