DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS23 and mrps12

DIOPT Version :10

Sequence 1:NP_610939.2 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_593866.2 Gene:mrps12 / 2543614 PomBaseID:SPAC4F8.06 Length:162 Species:Schizosaccharomyces pombe


Alignment Length:127 Identity:38/127 - (29%)
Similarity:67/127 - (52%) Gaps:22/127 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVR 71
            |:|..:.:  |..::..:|..|::   ...:.:||     .:|:......|:.|:||||:||..|
pombe    37 LKTLNQTI--RNKEKRPEKTNKQS---VALEGSPF-----RRGVCTRVFTVKPKKPNSAVRKVAR 91

  Fly    72 VQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK----VANVS 129
            |:| ..|:.:||::|..|  :..:|:..||:.| ||    ..|.|||::.||:    :|.|:
pombe    92 VRL-STGRSVTAYIPGIG--HNAQEHAVVLLRG-GR----AQDCPGVQYHVVRGVYDIAGVA 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_610939.2 PTZ00067 1..143 CDD:185422 38/127 (30%)
mrps12NP_593866.2 RpsL 39..161 CDD:439818 37/125 (30%)

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