DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS23 and Mrps12

DIOPT Version :10

Sequence 1:NP_610939.2 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_036015.1 Gene:Mrps12 / 24030 MGIID:1346333 Length:139 Species:Mus musculus


Alignment Length:128 Identity:47/128 - (36%)
Similarity:64/128 - (50%) Gaps:24/128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RGLRTARKHVNHRRDQRWADKD---YKKAH-LGTR----WKANPFGGASHAKGIVLEKVGVEAKQ 61
            |||..|        .|.||.:.   ..:.| ||.|    .:..|..|....||:||.....:.|:
Mouse    16 RGLALA--------PQLWAARSMATLNQMHRLGPRKEPPKRLGPTEGRPQLKGVVLRTFIRKPKK 72

  Fly    62 PNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
            ||||.|||.||:| ..||:...|:|.:|  :.::|:..|||.| ||    ..|:|||:.|||:
Mouse    73 PNSANRKCCRVRL-STGKEAVCFIPGEG--HTLQEHHVVLVEG-GR----TQDLPGVKLKVVR 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_610939.2 PTZ00067 1..143 CDD:185422 47/128 (37%)
Mrps12NP_036015.1 Ribosomal_S12 32..138 CDD:239466 40/104 (38%)

Return to query results.
Submit another query.