DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS23 and mrps-12

DIOPT Version :10

Sequence 1:NP_610939.2 Gene:RpS23 / 36576 FlyBaseID:FBgn0033912 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_508023.1 Gene:mrps-12 / 180368 WormBaseID:WBGene00011391 Length:157 Species:Caenorhabditis elegans


Alignment Length:82 Identity:31/82 - (37%)
Similarity:48/82 - (58%) Gaps:8/82 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGR 107
            |.||.|||||:.|....|:|||..|||..|:| ..|.::.|::|..|  :.::|:.:|||.|..|
 Worm    72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLVKGGRR 133

  Fly   108 KGHAVGDIPGVRFKVVK 124
            :     |:..|:..:|:
 Worm   134 R-----DLISVKANIVR 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS23NP_610939.2 PTZ00067 1..143 CDD:185422 31/82 (38%)
mrps-12NP_508023.1 Ribosomal_S12 46..156 CDD:239466 31/82 (38%)

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