DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox15 and SOX13

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_005677.2 Gene:SOX13 / 9580 HGNCID:11192 Length:622 Species:Homo sapiens


Alignment Length:466 Identity:114/466 - (24%)
Similarity:170/466 - (36%) Gaps:165/466 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPSYDHEHPHHLLTNYNSKKYPHVSRTPEYSHSTGSDY-PEHGGYLTDGRLMHESNSDAGIYHVR 65
            |||    .|.:|.....:.:.|:.|.:|....|:.... |.|||...|                 
Human   288 EPS----QPLNLTAKPKAPELPNTSSSPSLKMSSCVPRPPSHGGPTRD----------------- 331

  Fly    66 QGSEHSSPSLHSPAIQSSGYENEHLNEAVLAAHSHSHSPMPMVSSAYVGGGTASGSLINSNIPLL 130
              .:.|.|||....:.......:.:.:|....||||.:                          |
Human   332 --LQSSPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGA--------------------------L 368

  Fly   131 GGGGNSVLNKFL----SHPHAGMVGGGTGQMEDCTSHSPIEAASMWSYDYKGDLCAPNCGYLERH 191
            .|..|:...|.|    |.|       ...::||...| |:|.| |.|.|..|          .||
Human   369 DGSPNTPFRKDLISLDSSP-------AKERLEDGCVH-PLEEA-MLSCDMDG----------SRH 414

  Fly   192 KPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
            .|              :|...|.|:|||||||||||.||:|:....||:||:.:||:||.:|:|:
Human   415 FP--------------ESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSM 465

  Fly   257 TPQDRRPYVEEAERLRVIHMTEHPNYKYRPR----------RRKQSKLRAMQPGGKEQSESS--- 308
            |.|:::||.||..||...|:.::|:|||:||          |.:..:.:|:....::.:..|   
Human   466 TNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVI 530

  Fly   309 -PNPGTGGSKSN----PKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYS 368
             |..|.....|:    |:.|..|||                                |||...|.
Human   531 PPQAGQVQMSSSDVLYPRAAGMPLA--------------------------------QPLVEHYV 563

  Fly   369 PSSVDCYSNADSTEQIESLAANCP--PALLNESS--PTGGGYDNSLLLKKLTKPSPSRAAKSRQE 429
            |.|:|                  |  |.::|..|  ..|.|.|:.      ...:.....:..::
Human   564 PRSLD------------------PNMPVIVNTCSLREEGEGTDDR------HSVADGEMYRYSED 604

  Fly   430 KLAKSEEKNKG 440
            :.::.|||:.|
Human   605 EDSEGEEKSDG 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 37/70 (53%)
SOX13NP_005677.2 SOX-TCF_HMG-box 423..494 CDD:238684 37/70 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.